HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:12.8 nTPM
HPA Brain:56.9 nTPM
GTEx:12.8 nTPM
FANTOM5:13.7 Scaled Tags Per Million
Pig:10.7 nTPM
Mouse:9.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062573
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.9
Sample id Sample description nTPM
Hippocampus
nTPM: 50.3
1911 Female, age 85, right hemisphere 60.8
2148 Female, age 91, left hemisphere 53.0
1855 Male, age 76, left hemisphere 50.9
2529 Female, age 94, left hemisphere 48.4
2621 Female, age 67, right hemisphere 46.5
1898 Male, age 80, left hemisphere 42.0
Dentate gyrus
nTPM: 51.1
1927 Female, age 91, both hemispheres 55.7
2246 Female, age 85, both hemispheres 54.4
2010 Male, age 76, both hemispheres 52.2
2531 Female, age 67, both hemispheres 51.5
2528 Male, age 74, both hemispheres 51.0
2530 Female, age 94, left hemisphere 42.0
Entorhinal gyrus
nTPM: 53.3
1938 Female, age 85, left hemisphere 57.4
2613 Female, age 94, left hemisphere 56.6
2686 Male, age 75, right hemisphere 54.0
1787 Male, age 76, left hemisphere 52.6
2764 Male, age 80, right hemisphere 50.9
2117 Female, age 91, right hemisphere 48.5
Hippocampus, CA1
nTPM: 51.7
2045 Male, age 76, both hemispheres 58.7
2082 Female, age 91, right hemisphere 57.6
1873 Female, age 85, both hemispheres 55.6
2527 Male, age 74, both hemispheres 46.7
2749 Male, age 80, left hemisphere 39.8
Hippocampus, CA2
nTPM: 49.5
2113 Female, age 91, right hemisphere 56.3
1940 Female, age 85, left hemisphere 53.5
2437 Female, age 94, left hemisphere 49.6
2249 Male, age 74, both hemispheres 48.4
1892 Male, age 76, both hemispheres 45.3
1963 Male, age 80, left hemisphere 43.9
Hippocampus, CA3
nTPM: 52.6
1891 Female, age 85, both hemispheres 59.8
2436 Male, age 74, both hemispheres 58.0
2620 Female, age 94, left hemisphere 57.5
2861 Female, age 67, both hemispheres 49.9
2137 Male, age 80, left hemisphere 46.0
1867 Male, age 76, both hemispheres 44.4
Parahippocampal cortex
nTPM: 56.4
1933 Female, age 85, both hemispheres 64.4
2693 Female, age 94, both hemispheres 61.1
2018 Male, age 76, both hemispheres 57.9
2692 Male, age 74, both hemispheres 57.5
2622 Female, age 67, right hemisphere 56.7
2532 Female, age 72, left hemisphere 56.0
1850 Male, age 80, both hemispheres 55.0
1990 Female, age 91, right hemisphere 54.8
2250 Female, age 67, right hemisphere 50.9
2245 Female, age 91, both hemispheres 50.1
Perirhinal gyrus
nTPM: 56.9
1841 Female, age 85, right hemisphere 63.2
2521 Female, age 94, right hemisphere 59.8
2848 Male, age 76, right hemisphere 55.1
1847 Female, age 91, left hemisphere 54.0
1794 Male, age 80, right hemisphere 52.3
Subiculum
nTPM: 51.2
2729 Female, age 91, right hemisphere 54.3
2438 Female, age 94, left hemisphere 53.1
1977 Female, age 85, both hemispheres 50.6
2619 Male, age 74, both hemispheres 50.3
2042 Male, age 76, both hemispheres 49.4
1901 Male, age 80, both hemispheres 49.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.8
Samples: 197

Max nTPM: 21.3
Min nTPM: 8.1
Std nTPM: 2.5
Median nTPM: 12.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 21.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 20.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 20.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 19.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 19.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 18.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 18.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 18.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 17.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 17.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 17.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.7
FF:10169-103B7 60 years, female 15.5
FF:10153-102I9 76 years, female 11.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.7
Pig sample Sample description nTPM
Subiculum
nTPM: 9.8
Samples: 4

Max nTPM: 10.5
Min nTPM: 9.1
Sample A Female 9.1
Sample B Female 9.2
Sample C Male 10.2
Sample D Male 10.5
Dorsal hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 12.2
Min nTPM: 9.2
Sample A Female 9.8
Sample B Female 10.1
Sample C Male 9.2
Sample D Male 12.2
Entorhinal cortex
nTPM: 10.7
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.3
Sample A Female 9.3
Sample B Female 11.5
Sample C Male 10.1
Sample D Male 11.9
Ventral hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 10.3
Min nTPM: 7.3
Sample A Female 9.5
Sample B Female 10.2
Sample C Male 7.3
Sample D Male 10.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.4
Samples: 4

Max nTPM: 8.5
Min nTPM: 8.2
Sample A Male 8.5
Sample B Male 8.4
Sample C Female 8.2
Sample D Female 8.4
Hippocampal formation
nTPM: 9.1
Samples: 4

Max nTPM: 10.1
Min nTPM: 8.6
Sample A Male 10.1
Sample B Male 8.6
Sample C Female 8.8
Sample D Female 9.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
67978661 Antisense, RP_040923_01_E02, Mouse strain C57BL/6J (56 days, male) 0.0

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