HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:26.7 nTPM
HPA Brain:37.8 nTPM
GTEx:26.7 nTPM
FANTOM5:103.6 Scaled Tags Per Million
Pig:75.2 nTPM
Mouse:113.2 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008208Antibody HPA011389
Glial cells Not detectedMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.8
Sample id Sample description nTPM
Hippocampus
nTPM: 29.0
1898 Male, age 80, left hemisphere 54.2
1855 Male, age 76, left hemisphere 28.6
2148 Female, age 91, left hemisphere 26.8
2621 Female, age 67, right hemisphere 25.2
1911 Female, age 85, right hemisphere 20.6
2529 Female, age 94, left hemisphere 18.8
Dentate gyrus
nTPM: 30.0
2010 Male, age 76, both hemispheres 39.9
1927 Female, age 91, both hemispheres 37.4
2531 Female, age 67, both hemispheres 28.6
2528 Male, age 74, both hemispheres 26.8
2530 Female, age 94, left hemisphere 24.3
2246 Female, age 85, both hemispheres 22.9
Entorhinal gyrus
nTPM: 17.4
2764 Male, age 80, right hemisphere 25.2
1938 Female, age 85, left hemisphere 18.7
1787 Male, age 76, left hemisphere 16.3
2117 Female, age 91, right hemisphere 16.0
2686 Male, age 75, right hemisphere 15.5
2613 Female, age 94, left hemisphere 13.0
Hippocampus, CA1
nTPM: 37.8
2749 Male, age 80, left hemisphere 74.2
1873 Female, age 85, both hemispheres 41.9
2045 Male, age 76, both hemispheres 29.1
2527 Male, age 74, both hemispheres 26.8
2082 Female, age 91, right hemisphere 17.0
Hippocampus, CA2
nTPM: 28.5
1963 Male, age 80, left hemisphere 54.2
1892 Male, age 76, both hemispheres 47.2
2249 Male, age 74, both hemispheres 22.8
2437 Female, age 94, left hemisphere 17.7
2113 Female, age 91, right hemisphere 16.5
1940 Female, age 85, left hemisphere 12.5
Hippocampus, CA3
nTPM: 29.3
2137 Male, age 80, left hemisphere 38.7
1867 Male, age 76, both hemispheres 35.5
2620 Female, age 94, left hemisphere 34.7
2436 Male, age 74, both hemispheres 24.2
2861 Female, age 67, both hemispheres 22.1
1891 Female, age 85, both hemispheres 20.6
Parahippocampal cortex
nTPM: 19.5
2250 Female, age 67, right hemisphere 24.5
1850 Male, age 80, both hemispheres 23.2
2245 Female, age 91, both hemispheres 22.9
1933 Female, age 85, both hemispheres 22.4
1990 Female, age 91, right hemisphere 21.0
2532 Female, age 72, left hemisphere 17.8
2693 Female, age 94, both hemispheres 17.7
2692 Male, age 74, both hemispheres 17.3
2018 Male, age 76, both hemispheres 17.0
2622 Female, age 67, right hemisphere 11.2
Perirhinal gyrus
nTPM: 22.4
1847 Female, age 91, left hemisphere 30.2
2521 Female, age 94, right hemisphere 24.0
1794 Male, age 80, right hemisphere 23.2
1841 Female, age 85, right hemisphere 19.6
2848 Male, age 76, right hemisphere 15.0
Subiculum
nTPM: 19.8
1977 Female, age 85, both hemispheres 27.1
1901 Male, age 80, both hemispheres 22.7
2729 Female, age 91, right hemisphere 18.7
2438 Female, age 94, left hemisphere 18.2
2042 Male, age 76, both hemispheres 16.7
2619 Male, age 74, both hemispheres 15.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.7
Samples: 197

Max nTPM: 60.5
Min nTPM: 12.8
Std nTPM: 9.8
Median nTPM: 23.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 60.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 54.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 54.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 52.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 50.3
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 47.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 46.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 46.8
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 44.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 44.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 44.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 103.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 103.6
FF:10169-103B7 60 years, female 145.4
FF:10153-102I9 76 years, female 61.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 75.2
Pig sample Sample description nTPM
Subiculum
nTPM: 73.5
Samples: 4

Max nTPM: 95.2
Min nTPM: 60.3
Sample A Female 95.2
Sample B Female 63.7
Sample C Male 74.9
Sample D Male 60.3
Dorsal hippocampus
nTPM: 74.5
Samples: 4

Max nTPM: 96.3
Min nTPM: 56.5
Sample A Female 96.3
Sample B Female 78.7
Sample C Male 66.4
Sample D Male 56.5
Entorhinal cortex
nTPM: 72.6
Samples: 4

Max nTPM: 77.7
Min nTPM: 64.2
Sample A Female 77.7
Sample B Female 72.7
Sample C Male 75.9
Sample D Male 64.2
Ventral hippocampus
nTPM: 75.3
Samples: 4

Max nTPM: 87.5
Min nTPM: 53.5
Sample A Female 84.6
Sample B Female 53.5
Sample C Male 87.5
Sample D Male 75.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 113.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 110.2
Samples: 4

Max nTPM: 126.9
Min nTPM: 100.6
Sample A Male 100.6
Sample B Male 106.1
Sample C Female 107.2
Sample D Female 126.9
Hippocampal formation
nTPM: 113.2
Samples: 4

Max nTPM: 123.9
Min nTPM: 100.9
Sample A Male 112.2
Sample B Male 115.9
Sample C Female 123.9
Sample D Female 100.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
74822941 Antisense, RP_060321_01_B02, Mouse strain C57BL/6J (56 days, male) 1.6

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