HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:29.9 nTPM
HPA Brain:42.4 nTPM
GTEx:29.9 nTPM
FANTOM5:29.6 Scaled Tags Per Million
Pig:73.3 nTPM
Mouse:105.2 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067026
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.4
Sample id Sample description nTPM
Hippocampus
nTPM: 36.9
1898 Male, age 80, left hemisphere 43.3
1855 Male, age 76, left hemisphere 38.5
2621 Female, age 67, right hemisphere 37.5
1911 Female, age 85, right hemisphere 35.2
2148 Female, age 91, left hemisphere 34.3
2529 Female, age 94, left hemisphere 32.8
Dentate gyrus
nTPM: 42.4
2530 Female, age 94, left hemisphere 48.1
1927 Female, age 91, both hemispheres 45.6
2246 Female, age 85, both hemispheres 42.6
2010 Male, age 76, both hemispheres 41.8
2528 Male, age 74, both hemispheres 40.8
2531 Female, age 67, both hemispheres 35.3
Entorhinal gyrus
nTPM: 36.5
1938 Female, age 85, left hemisphere 46.8
2117 Female, age 91, right hemisphere 36.7
2613 Female, age 94, left hemisphere 36.4
1787 Male, age 76, left hemisphere 35.1
2764 Male, age 80, right hemisphere 33.1
2686 Male, age 75, right hemisphere 31.0
Hippocampus, CA1
nTPM: 40.1
2749 Male, age 80, left hemisphere 48.9
1873 Female, age 85, both hemispheres 44.7
2527 Male, age 74, both hemispheres 38.3
2045 Male, age 76, both hemispheres 38.0
2082 Female, age 91, right hemisphere 30.6
Hippocampus, CA2
nTPM: 38.8
1892 Male, age 76, both hemispheres 44.9
2249 Male, age 74, both hemispheres 44.1
1963 Male, age 80, left hemisphere 41.3
1940 Female, age 85, left hemisphere 35.5
2437 Female, age 94, left hemisphere 35.0
2113 Female, age 91, right hemisphere 31.9
Hippocampus, CA3
nTPM: 35.4
2137 Male, age 80, left hemisphere 44.8
2436 Male, age 74, both hemispheres 39.5
1867 Male, age 76, both hemispheres 36.2
1891 Female, age 85, both hemispheres 35.5
2620 Female, age 94, left hemisphere 30.9
2861 Female, age 67, both hemispheres 25.6
Parahippocampal cortex
nTPM: 41.3
2250 Female, age 67, right hemisphere 52.2
1933 Female, age 85, both hemispheres 44.5
2532 Female, age 72, left hemisphere 44.0
1850 Male, age 80, both hemispheres 43.8
2245 Female, age 91, both hemispheres 42.4
2693 Female, age 94, both hemispheres 42.2
1990 Female, age 91, right hemisphere 41.0
2018 Male, age 76, both hemispheres 37.8
2692 Male, age 74, both hemispheres 36.1
2622 Female, age 67, right hemisphere 28.9
Perirhinal gyrus
nTPM: 42.2
1841 Female, age 85, right hemisphere 46.2
2848 Male, age 76, right hemisphere 42.6
1794 Male, age 80, right hemisphere 41.6
2521 Female, age 94, right hemisphere 41.2
1847 Female, age 91, left hemisphere 39.5
Subiculum
nTPM: 37.0
2438 Female, age 94, left hemisphere 43.1
1977 Female, age 85, both hemispheres 41.1
2042 Male, age 76, both hemispheres 37.0
1901 Male, age 80, both hemispheres 35.9
2729 Female, age 91, right hemisphere 34.9
2619 Male, age 74, both hemispheres 30.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.9
Samples: 197

Max nTPM: 66.6
Min nTPM: 17.5
Std nTPM: 5.9
Median nTPM: 29.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 66.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 42.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 42.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 42.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 41.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 41.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 41.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 39.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 39.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 39.4
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 38.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.6
FF:10169-103B7 60 years, female 38.4
FF:10153-102I9 76 years, female 20.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 73.3
Pig sample Sample description nTPM
Subiculum
nTPM: 67.6
Samples: 4

Max nTPM: 77.5
Min nTPM: 61.5
Sample A Female 77.5
Sample B Female 66.0
Sample C Male 61.5
Sample D Male 65.5
Dorsal hippocampus
nTPM: 69.4
Samples: 4

Max nTPM: 71.8
Min nTPM: 65.1
Sample A Female 70.8
Sample B Female 71.8
Sample C Male 69.8
Sample D Male 65.1
Entorhinal cortex
nTPM: 73.3
Samples: 4

Max nTPM: 84.1
Min nTPM: 68.3
Sample A Female 68.3
Sample B Female 84.1
Sample C Male 72.2
Sample D Male 68.7
Ventral hippocampus
nTPM: 64.4
Samples: 4

Max nTPM: 71.5
Min nTPM: 61.1
Sample A Female 71.5
Sample B Female 63.0
Sample C Male 62.1
Sample D Male 61.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 105.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 100.3
Samples: 4

Max nTPM: 109.7
Min nTPM: 89.3
Sample A Male 102.7
Sample B Male 109.7
Sample C Female 99.5
Sample D Female 89.3
Hippocampal formation
nTPM: 105.2
Samples: 4

Max nTPM: 119.1
Min nTPM: 97.7
Sample A Male 119.1
Sample B Male 103.5
Sample C Female 97.7
Sample D Female 100.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
68666738 Antisense, RP_050203_01_E05, Mouse strain C57BL/6J (56 days, male) 2.0

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