HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:35.4 nTPM
HPA Brain:139.1 nTPM
GTEx:35.4 nTPM
FANTOM5:88.1 Scaled Tags Per Million
Pig:132.0 nTPM
Mouse:101.7 nTPM
Allen mouse:19.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB037256
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 139.1
Sample id Sample description nTPM
Hippocampus
nTPM: 116.7
1898 Male, age 80, left hemisphere 154.2
1855 Male, age 76, left hemisphere 118.2
2621 Female, age 67, right hemisphere 117.7
2529 Female, age 94, left hemisphere 108.3
2148 Female, age 91, left hemisphere 101.4
1911 Female, age 85, right hemisphere 100.1
Dentate gyrus
nTPM: 116.9
2010 Male, age 76, both hemispheres 136.6
1927 Female, age 91, both hemispheres 133.1
2530 Female, age 94, left hemisphere 122.7
2246 Female, age 85, both hemispheres 108.9
2531 Female, age 67, both hemispheres 100.8
2528 Male, age 74, both hemispheres 99.4
Entorhinal gyrus
nTPM: 119.3
2764 Male, age 80, right hemisphere 138.0
1938 Female, age 85, left hemisphere 135.6
1787 Male, age 76, left hemisphere 117.0
2613 Female, age 94, left hemisphere 113.7
2686 Male, age 75, right hemisphere 107.1
2117 Female, age 91, right hemisphere 104.6
Hippocampus, CA1
nTPM: 131.0
2749 Male, age 80, left hemisphere 199.5
1873 Female, age 85, both hemispheres 125.7
2045 Male, age 76, both hemispheres 124.6
2527 Male, age 74, both hemispheres 106.8
2082 Female, age 91, right hemisphere 98.3
Hippocampus, CA2
nTPM: 116.9
1963 Male, age 80, left hemisphere 153.7
1892 Male, age 76, both hemispheres 142.4
2437 Female, age 94, left hemisphere 107.6
2249 Male, age 74, both hemispheres 105.4
2113 Female, age 91, right hemisphere 96.2
1940 Female, age 85, left hemisphere 96.1
Hippocampus, CA3
nTPM: 122.1
2137 Male, age 80, left hemisphere 161.8
1867 Male, age 76, both hemispheres 129.9
2620 Female, age 94, left hemisphere 116.4
2436 Male, age 74, both hemispheres 112.4
1891 Female, age 85, both hemispheres 109.3
2861 Female, age 67, both hemispheres 102.5
Parahippocampal cortex
nTPM: 114.4
1850 Male, age 80, both hemispheres 154.4
1933 Female, age 85, both hemispheres 123.3
1990 Female, age 91, right hemisphere 120.8
2018 Male, age 76, both hemispheres 120.3
2245 Female, age 91, both hemispheres 115.3
2532 Female, age 72, left hemisphere 112.2
2250 Female, age 67, right hemisphere 109.5
2693 Female, age 94, both hemispheres 103.5
2692 Male, age 74, both hemispheres 97.6
2622 Female, age 67, right hemisphere 87.0
Perirhinal gyrus
nTPM: 139.1
1847 Female, age 91, left hemisphere 163.1
1794 Male, age 80, right hemisphere 154.7
1841 Female, age 85, right hemisphere 140.0
2848 Male, age 76, right hemisphere 119.3
2521 Female, age 94, right hemisphere 118.6
Subiculum
nTPM: 108.7
1901 Male, age 80, both hemispheres 126.5
1977 Female, age 85, both hemispheres 125.4
2042 Male, age 76, both hemispheres 112.2
2438 Female, age 94, left hemisphere 98.3
2619 Male, age 74, both hemispheres 96.3
2729 Female, age 91, right hemisphere 93.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.4
Samples: 197

Max nTPM: 62.6
Min nTPM: 17.1
Std nTPM: 9.4
Median nTPM: 33.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 62.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 61.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 59.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 57.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 56.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 55.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 54.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 54.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 54.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 53.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 53.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 88.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.1
FF:10153-102I9 76 years, female 88.9
FF:10169-103B7 60 years, female 87.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 132.0
Pig sample Sample description nTPM
Subiculum
nTPM: 122.1
Samples: 4

Max nTPM: 154.0
Min nTPM: 109.4
Sample A Female 154.0
Sample B Female 113.0
Sample C Male 111.9
Sample D Male 109.4
Dorsal hippocampus
nTPM: 132.0
Samples: 4

Max nTPM: 165.1
Min nTPM: 105.1
Sample A Female 165.1
Sample B Female 134.9
Sample C Male 122.7
Sample D Male 105.1
Entorhinal cortex
nTPM: 119.8
Samples: 4

Max nTPM: 131.0
Min nTPM: 101.6
Sample A Female 119.1
Sample B Female 131.0
Sample C Male 127.5
Sample D Male 101.6
Ventral hippocampus
nTPM: 116.8
Samples: 4

Max nTPM: 132.1
Min nTPM: 94.5
Sample A Female 132.1
Sample B Female 94.5
Sample C Male 124.3
Sample D Male 116.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 101.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.0
Samples: 4

Max nTPM: 97.7
Min nTPM: 91.6
Sample A Male 93.3
Sample B Male 93.3
Sample C Female 91.6
Sample D Female 97.7
Hippocampal formation
nTPM: 101.7
Samples: 4

Max nTPM: 112.8
Min nTPM: 92.6
Sample A Male 92.6
Sample B Male 103.7
Sample C Female 112.8
Sample D Female 97.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.9
67814217 Antisense, RP_040920_01_G05, Mouse strain C57BL/6J (56 days, male) 19.9

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