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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
54.1
nTPM
GTEx:
54.1
nTPM
FANTOM5:
53.2
Scaled Tags Per Million
Pig:
60.8
nTPM
Mouse:
80.1
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
54.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 54.1
Samples: 105
Max nTPM: 77.2
Min nTPM: 37.8
Std nTPM: 8.0
Median nTPM: 0.0
491_1
89 years, female
77.2
490_1
67 years, female
72.4
495_1
57 years, female
71.8
413_1
59 years, female
71.1
139_1
64 years, female
70.5
415_1
77 years, female
69.8
308_1
70 years, female
67.6
32_1
67 years, male
67.1
501_1
88 years, male
65.7
89_1
63 years, male
65.6
149_1
88 years, male
64.7
347_1
72 years, male
64.6
466_1
57 years, female
64.5
81_1
67 years, male
64.3
162_1
79 years, female
64.2
414_1
84 years, female
63.2
307_1
66 years, female
62.3
177_1
74 years, male
61.8
315_1
62 years, female
61.0
109_1
81 years, female
60.8
266_1
85 years, male
60.7
145_1
84 years, male
60.2
126_1
63 years, male
60.0
17_1
71 years, male
59.8
324_1
76 years, male
59.7
142_1
61 years, female
59.3
163_1
78 years, male
58.5
2_1
77 years, female
58.4
43_1
64 years, female
57.9
117_1
61 years, male
57.9
173_1
67 years, male
57.9
115_1
83 years, male
57.8
35_1
74 years, female
57.4
246_1
77 years, male
57.2
153_1
70 years, female
57.1
18_1
88 years, male
56.9
9_1
66 years, female
56.8
120_1
70 years, female
56.8
499_1
55 years, female
56.7
6_1
73 years, female
56.3
526_1
61 years, male
56.3
217_1
76 years, male
55.8
119_1
70 years, female
55.5
322_1
76 years, male
55.2
468_1
89 years, male
55.2
254_1
77 years, female
54.9
41_1
94 years, female
54.7
447_1
81 years, male
54.7
518_1
75 years, female
54.5
42_1
85 years, male
54.3
311_1
78 years, male
54.3
229_1
69 years, female
54.0
99_1
64 years, male
53.9
348_1
84 years, male
53.8
288_1
66 years, female
53.7
313_1
79 years, female
53.0
321_1
62 years, female
52.5
379_1
60 years, male
52.4
425_1
59 years, female
52.4
384_1
83 years, male
52.1
316_1
62 years, male
51.9
405_1
91 years, male
51.4
251_1
78 years, male
51.3
396_1
62 years, male
51.3
137_1
83 years, male
51.2
265_1
87 years, male
51.1
386_1
76 years, male
51.0
292_1
71 years, male
50.7
375_1
74 years, female
50.6
318_1
68 years, male
50.3
452_1
88 years, female
50.3
317_1
60 years, male
50.0
4_1
88 years, female
49.3
320_1
89 years, female
49.1
314_1
67 years, male
49.0
404_1
82 years, female
48.7
406_1
79 years, male
48.4
189_1
76 years, male
48.3
286_1
68 years, female
48.3
377_1
82 years, female
47.7
293_1
68 years, female
47.6
517_1
88 years, male
47.6
503_1
68 years, male
47.1
218_1
71 years, female
46.6
355_1
70 years, female
46.3
349_1
83 years, male
46.2
243_1
75 years, male
46.1
335_1
73 years, female
46.1
376_1
75 years, female
46.0
295_1
61 years, female
45.8
172_1
72 years, female
45.7
480_1
63 years, male
45.6
506_1
65 years, male
45.3
291_1
76 years, male
45.0
389_1
86 years, female
44.8
264_1
73 years, female
43.6
319_1
81 years, male
43.4
237_1
82 years, male
42.6
352_1
62 years, male
42.5
350_1
84 years, female
42.2
353_1
82 years, female
41.5
351_1
91 years, male
41.1
394_1
75 years, female
40.6
356_1
87 years, female
37.9
354_1
81 years, female
37.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
