HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:12.6 nTPM
HPA Brain:12.7 nTPM
GTEx:12.6 nTPM
FANTOM5:56.1 Scaled Tags Per Million
Pig:5.7 nTPM
Mouse:14.8 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030159Antibody HPA030160Antibody HPA030161
Glial cells Not detectedLowNot detected
Neuronal cells LowMediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.7
Sample id Sample description nTPM
Hippocampus
nTPM: 12.7
1898 Male, age 80, left hemisphere 14.2
2621 Female, age 67, right hemisphere 13.9
1911 Female, age 85, right hemisphere 12.5
1855 Male, age 76, left hemisphere 12.2
2529 Female, age 94, left hemisphere 11.8
2148 Female, age 91, left hemisphere 11.7
Dentate gyrus
nTPM: 11.9
2010 Male, age 76, both hemispheres 13.5
1927 Female, age 91, both hemispheres 12.6
2246 Female, age 85, both hemispheres 11.9
2530 Female, age 94, left hemisphere 11.9
2531 Female, age 67, both hemispheres 11.9
2528 Male, age 74, both hemispheres 9.5
Entorhinal gyrus
nTPM: 11.3
2686 Male, age 75, right hemisphere 12.1
2613 Female, age 94, left hemisphere 11.9
1938 Female, age 85, left hemisphere 11.7
2117 Female, age 91, right hemisphere 11.6
2764 Male, age 80, right hemisphere 10.4
1787 Male, age 76, left hemisphere 10.1
Hippocampus, CA1
nTPM: 12.5
2749 Male, age 80, left hemisphere 16.6
1873 Female, age 85, both hemispheres 13.2
2527 Male, age 74, both hemispheres 11.5
2082 Female, age 91, right hemisphere 10.8
2045 Male, age 76, both hemispheres 10.4
Hippocampus, CA2
nTPM: 11.8
1963 Male, age 80, left hemisphere 14.5
1892 Male, age 76, both hemispheres 13.8
1940 Female, age 85, left hemisphere 11.3
2249 Male, age 74, both hemispheres 10.9
2113 Female, age 91, right hemisphere 10.5
2437 Female, age 94, left hemisphere 9.8
Hippocampus, CA3
nTPM: 12.3
2137 Male, age 80, left hemisphere 14.3
1867 Male, age 76, both hemispheres 12.6
1891 Female, age 85, both hemispheres 12.6
2620 Female, age 94, left hemisphere 12.1
2861 Female, age 67, both hemispheres 11.3
2436 Male, age 74, both hemispheres 11.1
Parahippocampal cortex
nTPM: 11.9
2245 Female, age 91, both hemispheres 13.2
2018 Male, age 76, both hemispheres 13.0
2622 Female, age 67, right hemisphere 12.2
2250 Female, age 67, right hemisphere 12.0
2532 Female, age 72, left hemisphere 11.9
1850 Male, age 80, both hemispheres 11.8
2693 Female, age 94, both hemispheres 11.7
1933 Female, age 85, both hemispheres 11.5
2692 Male, age 74, both hemispheres 11.5
1990 Female, age 91, right hemisphere 10.7
Perirhinal gyrus
nTPM: 11.0
2848 Male, age 76, right hemisphere 12.1
1841 Female, age 85, right hemisphere 12.0
2521 Female, age 94, right hemisphere 10.6
1847 Female, age 91, left hemisphere 10.3
1794 Male, age 80, right hemisphere 9.9
Subiculum
nTPM: 12.4
2042 Male, age 76, both hemispheres 14.2
2438 Female, age 94, left hemisphere 13.4
1901 Male, age 80, both hemispheres 13.1
1977 Female, age 85, both hemispheres 12.1
2729 Female, age 91, right hemisphere 11.0
2619 Male, age 74, both hemispheres 10.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.6
Samples: 197

Max nTPM: 26.1
Min nTPM: 6.8
Std nTPM: 2.8
Median nTPM: 12.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 26.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 23.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 22.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 21.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 19.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 19.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 19.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 18.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 18.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 17.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 17.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.1
FF:10169-103B7 60 years, female 74.7
FF:10153-102I9 76 years, female 37.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.7
Pig sample Sample description nTPM
Subiculum
nTPM: 5.3
Samples: 4

Max nTPM: 5.6
Min nTPM: 5.0
Sample A Female 5.2
Sample B Female 5.0
Sample C Male 5.3
Sample D Male 5.6
Dorsal hippocampus
nTPM: 5.7
Samples: 4

Max nTPM: 5.8
Min nTPM: 5.6
Sample A Female 5.8
Sample B Female 5.6
Sample C Male 5.6
Sample D Male 5.6
Entorhinal cortex
nTPM: 5.1
Samples: 4

Max nTPM: 5.7
Min nTPM: 4.2
Sample A Female 5.2
Sample B Female 5.3
Sample C Male 4.2
Sample D Male 5.7
Ventral hippocampus
nTPM: 4.9
Samples: 4

Max nTPM: 5.6
Min nTPM: 4.5
Sample A Female 4.9
Sample B Female 4.5
Sample C Male 4.7
Sample D Male 5.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.8
Samples: 4

Max nTPM: 13.9
Min nTPM: 11.9
Sample A Male 11.9
Sample B Male 12.5
Sample C Female 13.9
Sample D Female 12.8
Hippocampal formation
nTPM: 14.8
Samples: 4

Max nTPM: 15.7
Min nTPM: 13.3
Sample A Male 15.2
Sample B Male 14.9
Sample C Female 15.7
Sample D Female 13.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
69202830 Antisense, RP_050324_04_D12, Mouse strain C57BL/6J (56 days, male) 5.1

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