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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
248.1
nTPM
FANTOM5:
323.8
Scaled Tags Per Million
Pig:
132.9
nTPM
Allen mouse:
5.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
248.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 214.0
2188
Female, age 91, both hemispheres
271.0
2090
Male, age 80, both hemispheres
237.7
2301
Female, age 85, both hemispheres
193.1
1984
Male, age 76, both hemispheres
154.1
Dorsal cochlear nucleus nTPM: 227.8
2802
Male, age 74, right hemisphere
272.8
2378
Male, age 80, both hemispheres
247.8
2370
Male, age 61, both hemispheres
209.3
2187
Female, age 91, both hemispheres
208.8
2058
Male, age 76, both hemispheres
200.5
Dorsal tegmental nucleus nTPM: 201.0
2326
Male, age 74, both hemispheres
232.0
2083
Male, age 80, both hemispheres
224.6
1936
Male, age 76, left hemisphere
191.3
2358
Male, age 61, both hemispheres
155.9
Dorsolateral tegmental area nTPM: 189.3
2654
Male, age 80, both hemispheres
246.2
2751
Female, age 85, both hemispheres
216.3
2337
Male, age 61, both hemispheres
176.8
2360
Male, age 74, both hemispheres
169.8
2141
Male, age 76, both hemispheres
137.7
Kolliker-Fuse nucleus nTPM: 214.6
2793
Female, age 91, left hemisphere
249.8
2163
Male, age 80, both hemispheres
203.4
2315
Male, age 76, right hemisphere
190.7
Lateral lemniscal nuclei nTPM: 183.7
2320
Female, age 91, left hemisphere
202.7
2169
Male, age 76, both hemispheres
187.4
2746
Female, age 85, left hemisphere
176.7
2453
Male, age 74, right hemisphere
176.2
2036
Male, age 80, both hemispheres
175.7
Lateral parabrachial nucleus nTPM: 211.7
2792
Male, age 76, both hemispheres
259.6
2013
Male, age 80, both hemispheres
217.8
2790
Male, age 61, both hemispheres
201.6
2139
Female, age 85, right hemisphere
167.9
Lateral vestibular nucleus nTPM: 205.7
2311
Male, age 80, both hemispheres
207.6
2184
Male, age 76, both hemispheres
203.8
Locus coeruleus nTPM: 167.1
2014
Male, age 55, unknown
192.0
2720
Male, age 74, both hemispheres
192.0
2788
Male, age 74, unknown
176.0
2162
Male, age 80, both hemispheres
157.4
2123
Female, age 91, both hemispheres
153.4
1980
Male, age 76, both hemispheres
150.0
2317
Female, age 72, unknown
149.1
Medial parabrachial nucleus nTPM: 198.0
2170
Female, age 91, both hemispheres
214.2
2463
Female, age 85, right hemisphere
206.7
2156
Male, age 61, both hemispheres
194.9
2786
Male, age 76, both hemispheres
189.8
2854
Male, age 80, both hemispheres
184.3
Medial periolivary nuclei nTPM: 189.7
2081
Male, age 80, both hemispheres
209.6
2458
Female, age 91, both hemispheres
202.7
2063
Male, age 76, both hemispheres
202.3
2791
Male, age 74, right hemisphere
173.4
2171
Female, age 85, both hemispheres
160.6
Motor facial nucleus nTPM: 198.4
2697
Female, age 85, both hemispheres
220.4
2795
Female, age 91, both hemispheres
212.8
2126
Male, age 61, both hemispheres
205.1
2327
Male, age 80, both hemispheres
189.6
2062
Male, age 76, both hemispheres
184.4
2365
Male, age 74, right hemisphere
178.2
Motor trigeminal nucleus nTPM: 195.9
2321
Female, age 91, both hemispheres
209.6
2309
Male, age 76, both hemispheres
207.5
2560
Male, age 74, both hemispheres
197.8
2079
Male, age 80, both hemispheres
187.5
2335
Male, age 61, both hemispheres
176.8
Nuclei of the trapezoid body nTPM: 191.8
2166
Male, age 80, both hemispheres
227.1
2368
Female, age 91, both hemispheres
208.0
1983
Male, age 76, both hemispheres
187.7
2159
Male, age 61, both hemispheres
185.9
2735
Female, age 85, both hemispheres
150.3
Nucleus raphe magnus nTPM: 177.3
2459
Female, age 91, both hemispheres
206.2
2051
Male, age 76, both hemispheres
203.0
2328
Male, age 80, both hemispheres
203.0
2455
Male, age 74, both hemispheres
158.3
2160
Male, age 61, both hemispheres
153.0
2172
Female, age 85, both hemispheres
140.5
Paramedian reticular nucleus nTPM: 218.9
2052
Male, age 76, both hemispheres
263.2
2057
Male, age 80, both hemispheres
225.5
2050
Female, age 85, both hemispheres
195.4
2313
Male, age 61, both hemispheres
191.3
Pedunculopontine tegmental nucleus nTPM: 178.8
2334
Male, age 80, both hemispheres
189.2
2338
Male, age 61, both hemispheres
178.8
1921
Female, age 85, both hemispheres
168.3
Pontine nuclei nTPM: 199.0
2319
Female, age 91, both hemispheres
238.7
1863
Male, age 55, unknown
219.9
2115
Male, age 80, left hemisphere
211.1
1968
Male, age 76, left hemisphere
209.3
2109
Female, age 72, unknown
199.8
2454
Male, age 74, left hemisphere
198.3
2727
Male, age 61, right hemisphere
158.3
2787
Female, age 85, both hemispheres
156.6
Pontine raphe nucleus nTPM: 172.0
2122
Female, age 85, midline
173.3
2853
Male, age 76, midline
170.7
Posteroventral cochlear nucleus nTPM: 248.1
2135
Female, age 91, both hemispheres
308.1
2341
Male, age 80, both hemispheres
297.0
2371
Male, age 61, both hemispheres
254.2
2070
Male, age 76, both hemispheres
195.9
2752
Female, age 85, both hemispheres
185.5
Principal sensory trigeminal nucleus nTPM: 189.5
2367
Female, age 91, left hemisphere
214.1
2324
Male, age 76, both hemispheres
186.6
2008
Male, age 80, left hemisphere
179.4
2158
Male, age 61, both hemispheres
177.9
Reticular pontine nucleus, caudal nTPM: 215.0
2457
Female, age 91, both hemispheres
245.9
2559
Male, age 74, both hemispheres
229.4
2092
Male, age 76, both hemispheres
210.5
2332
Male, age 80, right hemisphere
174.1
Reticular pontine nucleus, oral nTPM: 211.3
2366
Female, age 91, both hemispheres
262.3
1939
Male, age 80, both hemispheres
211.5
2361
Male, age 74, both hemispheres
208.6
2167
Male, age 76, both hemispheres
188.3
2012
Female, age 85, both hemispheres
185.7
Reticulotegmental nucleus nTPM: 202.4
2452
Male, age 74, both hemispheres
230.2
2322
Female, age 91, both hemispheres
205.1
2333
Male, age 80, both hemispheres
195.1
2325
Male, age 76, both hemispheres
179.3
Spinal trigeminal nucleus, oral nTPM: 176.7
2164
Male, age 80, both hemispheres
205.5
1978
Male, age 76, both hemispheres
165.7
2737
Female, age 85, both hemispheres
158.8
Subcoeruleus area nTPM: 198.2
2451
Male, age 74, both hemispheres
235.7
2369
Female, age 85, left hemisphere
235.2
1958
Male, age 80, both hemispheres
187.6
2089
Male, age 76, left hemisphere
184.6
2323
Female, age 91, left hemisphere
148.0
Superior olive nTPM: 205.5
2020
Male, age 76, both hemispheres
254.8
2561
Female, age 91, both hemispheres
214.2
2329
Male, age 80, right hemisphere
195.8
1875
Female, age 85, both hemispheres
188.8
2364
Male, age 74, right hemisphere
173.7
Ventral periolivary nuclei nTPM: 191.7
2023
Male, age 76, both hemispheres
233.8
2794
Female, age 91, left hemisphere
197.8
2165
Male, age 80, both hemispheres
189.8
2130
Female, age 85, both hemispheres
145.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 188.1
2456
Female, age 91, both hemispheres
214.9
1959
Male, age 76, both hemispheres
201.2
2161
Male, age 80, both hemispheres
190.5
2840
Female, age 85, both hemispheres
188.6
2359
Male, age 61, both hemispheres
174.7
2449
Male, age 74, both hemispheres
158.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
132.9
Pig sample
Sample description
nTPM
Pons nTPM: 132.9
Samples: 4
Max nTPM: 145.3
Min nTPM: 112.4
Sample A
Female
135.6
Sample B
Female
112.4
Sample C
Male
138.2
Sample D
Male
145.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
