HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:177.0 nTPM
HPA Brain:161.4 nTPM
GTEx:177.0 nTPM
FANTOM5:247.9 Scaled Tags Per Million
Pig:117.6 nTPM
Mouse:108.3 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049538
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 161.4
Sample id Sample description nTPM
Hippocampus
nTPM: 143.0
2529 Female, age 94, left hemisphere 166.5
1898 Male, age 80, left hemisphere 153.5
1911 Female, age 85, right hemisphere 151.1
2621 Female, age 67, right hemisphere 141.3
1855 Male, age 76, left hemisphere 129.2
2148 Female, age 91, left hemisphere 116.5
Dentate gyrus
nTPM: 145.4
2530 Female, age 94, left hemisphere 227.2
2010 Male, age 76, both hemispheres 169.9
2531 Female, age 67, both hemispheres 135.5
2246 Female, age 85, both hemispheres 115.4
1927 Female, age 91, both hemispheres 115.2
2528 Male, age 74, both hemispheres 109.0
Entorhinal gyrus
nTPM: 160.3
2686 Male, age 75, right hemisphere 219.2
2117 Female, age 91, right hemisphere 187.1
2764 Male, age 80, right hemisphere 155.7
1938 Female, age 85, left hemisphere 142.4
2613 Female, age 94, left hemisphere 138.1
1787 Male, age 76, left hemisphere 119.3
Hippocampus, CA1
nTPM: 127.2
2749 Male, age 80, left hemisphere 173.3
1873 Female, age 85, both hemispheres 135.4
2082 Female, age 91, right hemisphere 120.5
2527 Male, age 74, both hemispheres 112.2
2045 Male, age 76, both hemispheres 94.8
Hippocampus, CA2
nTPM: 150.2
1963 Male, age 80, left hemisphere 210.6
2437 Female, age 94, left hemisphere 156.0
1892 Male, age 76, both hemispheres 147.4
1940 Female, age 85, left hemisphere 136.6
2113 Female, age 91, right hemisphere 130.9
2249 Male, age 74, both hemispheres 119.9
Hippocampus, CA3
nTPM: 121.9
1891 Female, age 85, both hemispheres 164.0
1867 Male, age 76, both hemispheres 155.5
2137 Male, age 80, left hemisphere 139.7
2861 Female, age 67, both hemispheres 112.3
2620 Female, age 94, left hemisphere 84.4
2436 Male, age 74, both hemispheres 75.3
Parahippocampal cortex
nTPM: 129.4
2692 Male, age 74, both hemispheres 159.0
1850 Male, age 80, both hemispheres 149.7
1990 Female, age 91, right hemisphere 146.2
2532 Female, age 72, left hemisphere 141.3
2018 Male, age 76, both hemispheres 139.5
2245 Female, age 91, both hemispheres 131.9
1933 Female, age 85, both hemispheres 127.1
2622 Female, age 67, right hemisphere 120.6
2693 Female, age 94, both hemispheres 98.2
2250 Female, age 67, right hemisphere 80.8
Perirhinal gyrus
nTPM: 112.9
1847 Female, age 91, left hemisphere 129.1
2848 Male, age 76, right hemisphere 121.9
1794 Male, age 80, right hemisphere 116.4
1841 Female, age 85, right hemisphere 112.5
2521 Female, age 94, right hemisphere 84.8
Subiculum
nTPM: 161.4
2042 Male, age 76, both hemispheres 199.2
1901 Male, age 80, both hemispheres 190.6
2438 Female, age 94, left hemisphere 187.4
1977 Female, age 85, both hemispheres 157.0
2729 Female, age 91, right hemisphere 125.9
2619 Male, age 74, both hemispheres 108.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 177.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 177.0
Samples: 197

Max nTPM: 568.9
Min nTPM: 44.7
Std nTPM: 90.0
Median nTPM: 150.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 568.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 534.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 464.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 463.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 457.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 417.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 392.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 391.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 380.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 378.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 358.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 247.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 247.9
FF:10153-102I9 76 years, female 261.1
FF:10169-103B7 60 years, female 234.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 117.6
Pig sample Sample description nTPM
Subiculum
nTPM: 96.0
Samples: 4

Max nTPM: 110.0
Min nTPM: 88.8
Sample A Female 110.0
Sample B Female 91.2
Sample C Male 88.8
Sample D Male 93.8
Dorsal hippocampus
nTPM: 117.6
Samples: 4

Max nTPM: 145.1
Min nTPM: 81.7
Sample A Female 145.1
Sample B Female 105.0
Sample C Male 138.5
Sample D Male 81.7
Entorhinal cortex
nTPM: 86.1
Samples: 4

Max nTPM: 91.8
Min nTPM: 80.2
Sample A Female 86.5
Sample B Female 91.8
Sample C Male 85.9
Sample D Male 80.2
Ventral hippocampus
nTPM: 98.0
Samples: 4

Max nTPM: 111.1
Min nTPM: 77.1
Sample A Female 108.0
Sample B Female 77.1
Sample C Male 95.7
Sample D Male 111.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 108.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 108.3
Samples: 4

Max nTPM: 118.6
Min nTPM: 98.0
Sample A Male 112.4
Sample B Male 118.6
Sample C Female 98.0
Sample D Female 104.3
Hippocampal formation
nTPM: 98.5
Samples: 4

Max nTPM: 105.6
Min nTPM: 92.5
Sample A Male 92.7
Sample B Male 105.6
Sample C Female 103.0
Sample D Female 92.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
69627027 Antisense, RP_050428_01_G03, Mouse strain C57BL/6J (56 days, male) 7.9

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