AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		103.214
RNA expressioni
Consensus:21.9 nTPM
HPA Brain:47.0 nTPM
GTEx:21.9 nTPM
FANTOM5:91.7 Scaled Tags Per Million
Pig:36.3 nTPM
Mouse:12.9 nTPM
Allen mouse:0.7 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA058106
Amygdala mean intensity 103.214
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 95.911
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 18.871
Cortical amygdala 103.214
Central amygdala 60.462
Medial amygdaloid nucleus 98.091

AMYGDALA - HPA Brain RNA-seq
Max nTPM 47.0
Sample id Sample description nTPM
Amygdala
nTPM: 47.0
2695 Female, age 67, right hemisphere 54.2
2514 Male, age 75, right hemisphere 47.0
2814 Male, age 76, right hemisphere 46.7
2517 Female, age 94, left hemisphere 46.4
1987 Female, age 91, left hemisphere 40.6
Basal amygdala
nTPM: 44.0
2827 Female, age 67, right hemisphere 54.9
2685 Female, age 94, left hemisphere 49.3
2110 Male, age 80, left hemisphere 44.6
1955 Male, age 76, both hemispheres 43.7
2243 Female, age 91, right hemisphere 37.9
2609 Male, age 75, right hemisphere 33.9
Central amygdala
nTPM: 38.6
2701 Female, age 91, right hemisphere 50.6
2239 Male, age 80, left hemisphere 44.4
1905 Male, age 76, both hemispheres 44.1
2515 Male, age 75, right hemisphere 29.9
2826 Female, age 94, left hemisphere 24.0
Corticomedial amygdala
nTPM: 42.4
2242 Female, age 91, right hemisphere 50.7
2535 Female, age 67, right hemisphere 46.2
2240 Male, age 76, both hemispheres 44.2
2429 Female, age 94, left hemisphere 42.8
2428 Male, age 75, right hemisphere 38.1
2829 Male, age 80, left hemisphere 32.4
Lateral amygdala
nTPM: 45.2
2830 Female, age 67, right hemisphere 55.9
2516 Male, age 75, right hemisphere 47.2
2255 Female, age 91, right hemisphere 46.7
1883 Male, age 76, both hemispheres 43.8
2256 Male, age 80, left hemisphere 42.5
2534 Female, age 94, left hemisphere 35.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 21.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 21.9
Samples: 152

Max nTPM: 63.4
Min nTPM: 4.8
Std nTPM: 8.9
Median nTPM: 20.8
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 63.4
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 58.7
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 45.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 43.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 43.3
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 39.4
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 38.3
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 37.6
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 36.6
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 34.2
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 34.0
Show allShow less

AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 91.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 91.7
FF:10151-102I7 76 years, female 91.7

AMYGDALA - Pig RNA-seqi
Average nTPM 36.3
Pig sample Sample description nTPM
Amygdala
nTPM: 36.3
Samples: 4

Max nTPM: 48.5
Min nTPM: 30.4
Sample A Female 30.4
Sample B Female 48.5
Sample C Male 31.8
Sample D Male 34.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 12.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 12.9
Samples: 4

Max nTPM: 13.6
Min nTPM: 11.9
Sample A Male 13.4
Sample B Male 11.9
Sample C Female 12.8
Sample D Female 13.6

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.7
74047443 Antisense, RP_051214_01_G05, Mouse strain C57BL/6J (56 days, male) 1.7
70238925 Antisense, RP_050526_04_D05, Mouse strain C57BL/6J (56 days, male) 1.1
71147924 Antisense, RP_050719_02_G08, Mouse strain C57BL/6J (56 days, male) 0.0
71213117 Antisense, RP_050816_03_H08, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org