HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:89.6 nTPM
HPA Brain:111.2 nTPM
GTEx:89.6 nTPM
FANTOM5:132.7 Scaled Tags Per Million
Pig:71.1 nTPM
Mouse:215.9 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 111.2
Sample id Sample description nTPM
Hippocampus
nTPM: 98.4
2529 Female, age 94, left hemisphere 121.4
1911 Female, age 85, right hemisphere 105.9
1898 Male, age 80, left hemisphere 100.3
2148 Female, age 91, left hemisphere 91.5
1855 Male, age 76, left hemisphere 88.0
2621 Female, age 67, right hemisphere 83.1
Dentate gyrus
nTPM: 78.6
2528 Male, age 74, both hemispheres 129.2
2246 Female, age 85, both hemispheres 95.4
1927 Female, age 91, both hemispheres 71.8
2010 Male, age 76, both hemispheres 65.5
2530 Female, age 94, left hemisphere 63.5
2531 Female, age 67, both hemispheres 46.0
Entorhinal gyrus
nTPM: 83.5
2117 Female, age 91, right hemisphere 111.9
1938 Female, age 85, left hemisphere 103.0
1787 Male, age 76, left hemisphere 75.4
2764 Male, age 80, right hemisphere 73.4
2613 Female, age 94, left hemisphere 70.5
2686 Male, age 75, right hemisphere 67.1
Hippocampus, CA1
nTPM: 96.8
2527 Male, age 74, both hemispheres 144.1
2082 Female, age 91, right hemisphere 96.1
1873 Female, age 85, both hemispheres 93.6
2749 Male, age 80, left hemisphere 85.0
2045 Male, age 76, both hemispheres 65.3
Hippocampus, CA2
nTPM: 87.0
2249 Male, age 74, both hemispheres 142.3
2113 Female, age 91, right hemisphere 104.4
1940 Female, age 85, left hemisphere 78.5
2437 Female, age 94, left hemisphere 72.6
1892 Male, age 76, both hemispheres 63.1
1963 Male, age 80, left hemisphere 61.1
Hippocampus, CA3
nTPM: 91.8
2436 Male, age 74, both hemispheres 117.1
2137 Male, age 80, left hemisphere 112.8
1867 Male, age 76, both hemispheres 98.3
1891 Female, age 85, both hemispheres 98.1
2620 Female, age 94, left hemisphere 71.3
2861 Female, age 67, both hemispheres 53.5
Parahippocampal cortex
nTPM: 100.1
2250 Female, age 67, right hemisphere 142.5
1933 Female, age 85, both hemispheres 118.8
2692 Male, age 74, both hemispheres 104.5
1850 Male, age 80, both hemispheres 102.5
2693 Female, age 94, both hemispheres 97.9
2622 Female, age 67, right hemisphere 94.7
2018 Male, age 76, both hemispheres 94.6
2245 Female, age 91, both hemispheres 90.6
1990 Female, age 91, right hemisphere 81.9
2532 Female, age 72, left hemisphere 72.7
Perirhinal gyrus
nTPM: 111.2
1794 Male, age 80, right hemisphere 134.5
1841 Female, age 85, right hemisphere 131.9
1847 Female, age 91, left hemisphere 108.1
2521 Female, age 94, right hemisphere 102.0
2848 Male, age 76, right hemisphere 79.3
Subiculum
nTPM: 101.4
2729 Female, age 91, right hemisphere 127.9
2619 Male, age 74, both hemispheres 121.2
1901 Male, age 80, both hemispheres 101.1
2042 Male, age 76, both hemispheres 89.6
1977 Female, age 85, both hemispheres 86.1
2438 Female, age 94, left hemisphere 82.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 89.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 89.6
Samples: 197

Max nTPM: 209.1
Min nTPM: 18.1
Std nTPM: 37.4
Median nTPM: 84.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 209.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 199.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 191.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 180.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 179.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 177.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 172.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 168.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 167.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 166.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 164.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 132.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 132.7
FF:10153-102I9 76 years, female 167.9
FF:10169-103B7 60 years, female 97.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.1
Pig sample Sample description nTPM
Subiculum
nTPM: 55.2
Samples: 4

Max nTPM: 73.5
Min nTPM: 41.3
Sample A Female 73.5
Sample B Female 52.7
Sample C Male 53.3
Sample D Male 41.3
Dorsal hippocampus
nTPM: 53.4
Samples: 4

Max nTPM: 63.7
Min nTPM: 38.7
Sample A Female 63.7
Sample B Female 50.0
Sample C Male 61.1
Sample D Male 38.7
Entorhinal cortex
nTPM: 71.1
Samples: 4

Max nTPM: 81.5
Min nTPM: 62.6
Sample A Female 74.2
Sample B Female 66.1
Sample C Male 81.5
Sample D Male 62.6
Ventral hippocampus
nTPM: 58.6
Samples: 4

Max nTPM: 72.4
Min nTPM: 44.4
Sample A Female 54.6
Sample B Female 44.4
Sample C Male 72.4
Sample D Male 63.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 215.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 215.9
Samples: 4

Max nTPM: 232.2
Min nTPM: 175.1
Sample A Male 224.3
Sample B Male 175.1
Sample C Female 232.2
Sample D Female 231.8
Hippocampal formation
nTPM: 200.5
Samples: 4

Max nTPM: 234.4
Min nTPM: 174.5
Sample A Male 234.4
Sample B Male 184.4
Sample C Female 174.5
Sample D Female 208.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
70429429 Antisense, RP_050614_01_F06, Mouse strain C57BL/6J (56 days, male) 7.8
74047768 Antisense, RP_051214_01_H06, Mouse strain C57BL/6J (56 days, male) 5.7

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