HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:30.0 nTPM
HPA Brain:94.5 nTPM
GTEx:30.0 nTPM
FANTOM5:41.2 Scaled Tags Per Million
Pig:67.4 nTPM
Mouse:63.3 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053520
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 94.5
Sample id Sample description nTPM
Hippocampus
nTPM: 85.8
2148 Female, age 91, left hemisphere 99.1
1855 Male, age 76, left hemisphere 97.2
2621 Female, age 67, right hemisphere 89.3
1898 Male, age 80, left hemisphere 84.6
2529 Female, age 94, left hemisphere 75.7
1911 Female, age 85, right hemisphere 68.9
Dentate gyrus
nTPM: 83.8
2531 Female, age 67, both hemispheres 106.6
2246 Female, age 85, both hemispheres 84.4
2010 Male, age 76, both hemispheres 80.8
1927 Female, age 91, both hemispheres 79.3
2528 Male, age 74, both hemispheres 76.0
2530 Female, age 94, left hemisphere 75.6
Entorhinal gyrus
nTPM: 92.0
2686 Male, age 75, right hemisphere 109.7
2613 Female, age 94, left hemisphere 108.3
2764 Male, age 80, right hemisphere 89.9
1938 Female, age 85, left hemisphere 84.4
2117 Female, age 91, right hemisphere 82.7
1787 Male, age 76, left hemisphere 77.1
Hippocampus, CA1
nTPM: 84.1
2749 Male, age 80, left hemisphere 100.4
2045 Male, age 76, both hemispheres 85.4
2082 Female, age 91, right hemisphere 81.3
2527 Male, age 74, both hemispheres 78.0
1873 Female, age 85, both hemispheres 75.3
Hippocampus, CA2
nTPM: 77.0
1940 Female, age 85, left hemisphere 95.5
2437 Female, age 94, left hemisphere 81.5
1892 Male, age 76, both hemispheres 81.3
2113 Female, age 91, right hemisphere 75.5
1963 Male, age 80, left hemisphere 70.0
2249 Male, age 74, both hemispheres 58.5
Hippocampus, CA3
nTPM: 94.5
2861 Female, age 67, both hemispheres 139.8
2620 Female, age 94, left hemisphere 106.3
2137 Male, age 80, left hemisphere 104.6
1867 Male, age 76, both hemispheres 91.6
2436 Male, age 74, both hemispheres 64.6
1891 Female, age 85, both hemispheres 60.0
Parahippocampal cortex
nTPM: 93.9
2622 Female, age 67, right hemisphere 126.2
2693 Female, age 94, both hemispheres 115.2
2245 Female, age 91, both hemispheres 101.3
2532 Female, age 72, left hemisphere 97.9
1933 Female, age 85, both hemispheres 95.2
2692 Male, age 74, both hemispheres 91.5
2250 Female, age 67, right hemisphere 81.6
1850 Male, age 80, both hemispheres 79.0
2018 Male, age 76, both hemispheres 78.2
1990 Female, age 91, right hemisphere 72.8
Perirhinal gyrus
nTPM: 94.3
2521 Female, age 94, right hemisphere 124.9
1794 Male, age 80, right hemisphere 99.9
1847 Female, age 91, left hemisphere 90.8
1841 Female, age 85, right hemisphere 82.1
2848 Male, age 76, right hemisphere 73.8
Subiculum
nTPM: 79.7
2729 Female, age 91, right hemisphere 92.7
2619 Male, age 74, both hemispheres 82.6
2042 Male, age 76, both hemispheres 80.4
1977 Female, age 85, both hemispheres 77.3
1901 Male, age 80, both hemispheres 75.6
2438 Female, age 94, left hemisphere 69.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.0
Samples: 197

Max nTPM: 70.9
Min nTPM: 8.6
Std nTPM: 10.2
Median nTPM: 29.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 70.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 64.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 60.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 55.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 54.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 53.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 52.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 49.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 48.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 47.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 46.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.2
FF:10153-102I9 76 years, female 42.9
FF:10169-103B7 60 years, female 39.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 67.4
Pig sample Sample description nTPM
Subiculum
nTPM: 58.9
Samples: 4

Max nTPM: 72.7
Min nTPM: 50.5
Sample A Female 72.7
Sample B Female 50.5
Sample C Male 60.4
Sample D Male 51.8
Dorsal hippocampus
nTPM: 47.2
Samples: 4

Max nTPM: 53.1
Min nTPM: 37.7
Sample A Female 48.7
Sample B Female 53.1
Sample C Male 37.7
Sample D Male 49.1
Entorhinal cortex
nTPM: 67.4
Samples: 4

Max nTPM: 77.8
Min nTPM: 50.1
Sample A Female 77.0
Sample B Female 50.1
Sample C Male 77.8
Sample D Male 64.7
Ventral hippocampus
nTPM: 53.9
Samples: 4

Max nTPM: 72.9
Min nTPM: 42.1
Sample A Female 44.5
Sample B Female 42.1
Sample C Male 72.9
Sample D Male 56.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.3
Samples: 4

Max nTPM: 74.7
Min nTPM: 57.3
Sample A Male 60.2
Sample B Male 57.3
Sample C Female 61.1
Sample D Female 74.7
Hippocampal formation
nTPM: 55.6
Samples: 4

Max nTPM: 62.6
Min nTPM: 46.8
Sample A Male 46.8
Sample B Male 55.2
Sample C Female 57.6
Sample D Female 62.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
69863296 Antisense, RP_050331_04_H03, Mouse strain C57BL/6J (56 days, male) 8.6
74988711 Antisense, RP_060315_04_A10, Mouse strain C57BL/6J (56 days, male) 4.5

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