HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:65.0 nTPM
HPA Brain:512.6 nTPM
GTEx:65.0 nTPM
FANTOM5:588.3 Scaled Tags Per Million
Pig:322.8 nTPM
Mouse:389.4 nTPM
Allen mouse:13.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008209Antibody HPA023483Antibody CAB034434
Glial cells Not detectedLowHigh
Neuronal cells Not detectedLowHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 512.6
Sample id Sample description nTPM
Hippocampus
nTPM: 308.2
1898 Male, age 80, left hemisphere 402.3
2621 Female, age 67, right hemisphere 370.9
2148 Female, age 91, left hemisphere 339.2
1855 Male, age 76, left hemisphere 313.0
1911 Female, age 85, right hemisphere 229.0
2529 Female, age 94, left hemisphere 194.4
Dentate gyrus
nTPM: 376.5
2531 Female, age 67, both hemispheres 483.1
1927 Female, age 91, both hemispheres 474.7
2530 Female, age 94, left hemisphere 334.9
2246 Female, age 85, both hemispheres 333.4
2528 Male, age 74, both hemispheres 318.2
2010 Male, age 76, both hemispheres 314.7
Entorhinal gyrus
nTPM: 363.7
2764 Male, age 80, right hemisphere 463.3
2613 Female, age 94, left hemisphere 456.9
1938 Female, age 85, left hemisphere 394.6
1787 Male, age 76, left hemisphere 333.4
2686 Male, age 75, right hemisphere 328.6
2117 Female, age 91, right hemisphere 205.7
Hippocampus, CA1
nTPM: 393.3
2749 Male, age 80, left hemisphere 563.8
2045 Male, age 76, both hemispheres 375.1
1873 Female, age 85, both hemispheres 368.5
2527 Male, age 74, both hemispheres 346.8
2082 Female, age 91, right hemisphere 312.4
Hippocampus, CA2
nTPM: 335.2
1892 Male, age 76, both hemispheres 422.1
1940 Female, age 85, left hemisphere 367.1
2437 Female, age 94, left hemisphere 346.4
1963 Male, age 80, left hemisphere 328.7
2113 Female, age 91, right hemisphere 290.4
2249 Male, age 74, both hemispheres 256.6
Hippocampus, CA3
nTPM: 391.5
2620 Female, age 94, left hemisphere 541.8
2137 Male, age 80, left hemisphere 477.6
2861 Female, age 67, both hemispheres 426.0
1867 Male, age 76, both hemispheres 341.9
2436 Male, age 74, both hemispheres 296.9
1891 Female, age 85, both hemispheres 264.5
Parahippocampal cortex
nTPM: 389.7
1850 Male, age 80, both hemispheres 533.2
2693 Female, age 94, both hemispheres 469.6
2245 Female, age 91, both hemispheres 434.1
2532 Female, age 72, left hemisphere 432.6
1990 Female, age 91, right hemisphere 402.2
1933 Female, age 85, both hemispheres 377.1
2622 Female, age 67, right hemisphere 373.6
2250 Female, age 67, right hemisphere 347.9
2018 Male, age 76, both hemispheres 275.7
2692 Male, age 74, both hemispheres 250.6
Perirhinal gyrus
nTPM: 512.6
1794 Male, age 80, right hemisphere 601.9
1847 Female, age 91, left hemisphere 569.4
1841 Female, age 85, right hemisphere 499.6
2521 Female, age 94, right hemisphere 493.6
2848 Male, age 76, right hemisphere 398.7
Subiculum
nTPM: 271.1
1977 Female, age 85, both hemispheres 356.5
1901 Male, age 80, both hemispheres 305.4
2438 Female, age 94, left hemisphere 266.4
2619 Male, age 74, both hemispheres 258.8
2729 Female, age 91, right hemisphere 245.1
2042 Male, age 76, both hemispheres 194.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.0
Samples: 197

Max nTPM: 290.8
Min nTPM: 8.4
Std nTPM: 59.5
Median nTPM: 42.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 290.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 274.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 266.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 263.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 251.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 241.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 212.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 208.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 204.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 200.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 197.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 588.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 588.3
FF:10169-103B7 60 years, female 803.8
FF:10153-102I9 76 years, female 372.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 322.8
Pig sample Sample description nTPM
Subiculum
nTPM: 274.8
Samples: 4

Max nTPM: 364.6
Min nTPM: 231.2
Sample A Female 364.6
Sample B Female 231.2
Sample C Male 259.5
Sample D Male 243.8
Dorsal hippocampus
nTPM: 237.5
Samples: 4

Max nTPM: 282.5
Min nTPM: 192.9
Sample A Female 282.5
Sample B Female 256.8
Sample C Male 217.8
Sample D Male 192.9
Entorhinal cortex
nTPM: 322.8
Samples: 4

Max nTPM: 367.5
Min nTPM: 298.1
Sample A Female 367.5
Sample B Female 302.4
Sample C Male 298.1
Sample D Male 323.3
Ventral hippocampus
nTPM: 238.6
Samples: 4

Max nTPM: 313.5
Min nTPM: 170.1
Sample A Female 249.4
Sample B Female 170.1
Sample C Male 313.5
Sample D Male 221.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 389.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 389.4
Samples: 4

Max nTPM: 455.1
Min nTPM: 317.1
Sample A Male 376.2
Sample B Male 409.1
Sample C Female 317.1
Sample D Female 455.1
Hippocampal formation
nTPM: 275.6
Samples: 4

Max nTPM: 282.5
Min nTPM: 269.6
Sample A Male 273.2
Sample B Male 282.5
Sample C Female 276.9
Sample D Female 269.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.3
1009 Antisense, RP_040227_01_08, Mouse strain C57BL/6J (56 days, male) 13.3
1010 Antisense, RP_040227_01_08, Mouse strain C57BL/6J (56 days, male) 9.2

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