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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
196.8
nTPM
GTEx:
196.8
nTPM
FANTOM5:
207.4
Scaled Tags Per Million
Pig:
378.1
nTPM
Mouse:
488.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
196.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 196.8
Samples: 105
Max nTPM: 347.4
Min nTPM: 86.0
Std nTPM: 44.2
Median nTPM:
229_1
69 years, female
347.4
172_1
72 years, female
302.8
43_1
64 years, female
280.8
353_1
82 years, female
272.2
447_1
81 years, male
268.4
316_1
62 years, male
265.1
324_1
76 years, male
255.5
217_1
76 years, male
253.0
318_1
68 years, male
252.3
266_1
85 years, male
252.1
177_1
74 years, male
251.2
415_1
77 years, female
246.3
386_1
76 years, male
245.2
292_1
71 years, male
243.6
243_1
75 years, male
242.9
286_1
68 years, female
241.6
405_1
91 years, male
241.5
163_1
78 years, male
240.1
350_1
84 years, female
239.8
153_1
70 years, female
236.1
81_1
67 years, male
235.2
319_1
81 years, male
235.1
468_1
89 years, male
233.8
518_1
75 years, female
230.7
321_1
62 years, female
229.3
335_1
73 years, female
229.3
352_1
62 years, male
227.5
311_1
78 years, male
223.4
377_1
82 years, female
222.7
6_1
73 years, female
222.5
356_1
87 years, female
221.5
404_1
82 years, female
220.5
354_1
81 years, female
217.7
32_1
67 years, male
217.6
348_1
84 years, male
214.6
376_1
75 years, female
212.4
355_1
70 years, female
212.3
149_1
88 years, male
212.1
349_1
83 years, male
211.4
320_1
89 years, female
211.3
291_1
76 years, male
208.1
466_1
57 years, female
207.3
237_1
82 years, male
205.5
218_1
71 years, female
204.3
162_1
79 years, female
202.2
115_1
83 years, male
201.7
379_1
60 years, male
201.5
293_1
68 years, female
200.8
503_1
68 years, male
200.2
506_1
65 years, male
198.9
145_1
84 years, male
197.9
499_1
55 years, female
197.6
126_1
63 years, male
196.2
526_1
61 years, male
196.2
251_1
78 years, male
195.8
425_1
59 years, female
195.1
142_1
61 years, female
194.8
414_1
84 years, female
194.8
322_1
76 years, male
194.4
375_1
74 years, female
192.0
9_1
66 years, female
191.7
347_1
72 years, male
191.7
517_1
88 years, male
191.5
406_1
79 years, male
188.7
18_1
88 years, male
186.1
246_1
77 years, male
185.6
139_1
64 years, female
185.1
351_1
91 years, male
185.1
480_1
63 years, male
184.0
396_1
62 years, male
180.5
413_1
59 years, female
180.1
501_1
88 years, male
176.9
452_1
88 years, female
173.9
265_1
87 years, male
173.6
288_1
66 years, female
173.2
389_1
86 years, female
170.7
254_1
77 years, female
169.9
35_1
74 years, female
168.5
17_1
71 years, male
167.4
189_1
76 years, male
164.5
120_1
70 years, female
160.5
314_1
67 years, male
159.9
264_1
73 years, female
159.1
99_1
64 years, male
156.8
137_1
83 years, male
155.9
173_1
67 years, male
154.4
317_1
60 years, male
153.6
295_1
61 years, female
152.7
117_1
61 years, male
150.4
490_1
67 years, female
148.6
119_1
70 years, female
148.3
313_1
79 years, female
147.9
495_1
57 years, female
146.5
109_1
81 years, female
145.2
315_1
62 years, female
142.8
394_1
75 years, female
136.5
384_1
83 years, male
135.7
89_1
63 years, male
133.9
2_1
77 years, female
129.8
491_1
89 years, female
125.6
307_1
66 years, female
114.6
41_1
94 years, female
112.5
4_1
88 years, female
107.5
42_1
85 years, male
106.7
308_1
70 years, female
86.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.