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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
198.7
nTPM
Monaco:
241.6
nTPM
Schmiedel:
2696.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
198.7
HPA sample
nTPM
gdT-cell nTPM: 32.4
Samples: 6
Max nTPM: 56.1
Min nTPM: 12.7
P10809_1007
21.0
P10809_1022
31.4
P10809_1041
56.1
P10809_1060
31.0
P10809_1077
12.7
P10809_1098
41.9
MAIT T-cell nTPM: 164.9
Samples: 6
Max nTPM: 204.1
Min nTPM: 101.4
P10809_1006
189.3
P10809_1024
204.1
P10809_1043
174.1
P10809_1062
133.7
P10809_1083
101.4
P10809_1097
186.7
Memory CD4 T-cell nTPM: 116.1
Samples: 6
Max nTPM: 156.4
Min nTPM: 50.5
P10809_1014
149.5
P10809_1026
138.7
P10809_1045
139.3
P10809_1064
61.9
P10809_1086
50.5
P10809_1113
156.4
Memory CD8 T-cell nTPM: 68.7
Samples: 5
Max nTPM: 102.5
Min nTPM: 22.1
P10809_1012
102.5
P10809_1027
52.5
P10809_1046
76.6
P10809_1065
22.1
P10809_1111
90.0
Naive CD4 T-cell nTPM: 198.7
Samples: 6
Max nTPM: 255.3
Min nTPM: 152.2
P10809_1015
187.1
P10809_1030
184.9
P10809_1049
199.4
P10809_1068
213.1
P10809_1085
152.2
P10809_1112
255.3
Naive CD8 T-cell nTPM: 130.8
Samples: 6
Max nTPM: 201.5
Min nTPM: 14.7
P10809_1016
201.5
P10809_1031
144.9
P10809_1050
129.0
P10809_1069
98.8
P10809_1087
14.7
P10809_1110
195.9
T-reg nTPM: 97.2
Samples: 6
Max nTPM: 123.8
Min nTPM: 61.8
P10809_1018
109.1
P10809_1037
108.7
P10809_1056
123.8
P10809_1075
61.8
P10809_1094
88.8
P10809_1106
91.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
241.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 121.7
Samples: 4
Max nTPM: 142.3
Min nTPM: 95.4
RHH5202_R3573
95.4
RHH5230_R3602
142.3
RHH5259_R3631
138.7
RHH5288_R3660
110.4
Effector memory CD8 T-cell nTPM: 36.4
Samples: 4
Max nTPM: 49.0
Min nTPM: 27.0
RHH5203_R3574
30.9
RHH5231_R3603
27.0
RHH5260_R3632
38.6
RHH5289_R3661
49.0
MAIT T-cell nTPM: 214.4
Samples: 4
Max nTPM: 250.3
Min nTPM: 181.6
RHH5233_R3605
195.6
RHH5205_R3576
250.3
RHH5262_R3634
229.9
RHH5297_R3663
181.6
Memory CD4 T-cell TFH nTPM: 182.0
Samples: 4
Max nTPM: 230.9
Min nTPM: 146.5
RHH5300_R3666
146.5
RHH5236_R3608
178.4
RHH5265_R3637
230.9
RHH5208_R3579
172.0
Memory CD4 T-cell Th1 nTPM: 129.1
Samples: 4
Max nTPM: 177.2
Min nTPM: 90.4
RHH5210_R3581
138.8
RHH5302_R3668
109.9
RHH5238_R3610
90.4
RHH5267_R3639
177.2
Memory CD4 T-cell Th1/Th17 nTPM: 186.3
Samples: 4
Max nTPM: 220.1
Min nTPM: 169.4
RHH5303_R3669
169.4
RHH5211_R3582
220.1
RHH5239_R3611
177.3
RHH5268_R3640
178.4
Memory CD4 T-cell Th17 nTPM: 241.7
Samples: 4
Max nTPM: 269.3
Min nTPM: 206.3
RHH5304_R3670
250.5
RHH5212_R3583
206.3
RHH5240_R3612
269.3
RHH5269_R3641
240.5
Memory CD4 T-cell Th2 nTPM: 190.4
Samples: 4
Max nTPM: 239.3
Min nTPM: 158.2
RHH5305_R3671
158.2
RHH5213_R3584
194.2
RHH5241_R3613
169.8
RHH5270_R3642
239.3
Naive CD4 T-cell nTPM: 228.1
Samples: 4
Max nTPM: 272.6
Min nTPM: 199.9
RHH5306_R3672
215.8
RHH5214_R3585
199.9
RHH5242_R3614
224.2
RHH5271_R3643
272.6
Naive CD8 T-cell nTPM: 236.5
Samples: 4
Max nTPM: 300.7
Min nTPM: 185.6
RHH5201_R3572
187.1
RHH5229_R3601
185.6
RHH5258_R3630
300.7
RHH5287_R3659
272.6
Non-Vd2 gdTCR nTPM: 24.2
Samples: 4
Max nTPM: 35.5
Min nTPM: 12.8
RHH5235_R3607
35.5
RHH5264_R3636
32.0
RHH5207_R3578
12.8
RHH5299_R3665
16.3
T-reg nTPM: 197.2
Samples: 4
Max nTPM: 270.2
Min nTPM: 146.9
RHH5301_R3667
146.9
RHH5237_R3609
156.6
RHH5266_R3638
270.2
RHH5209_R3580
215.0
Terminal effector memory CD4 T-cell nTPM: 36.3
Samples: 2
Max nTPM: 52.1
Min nTPM: 20.4
RHH5243_R3615
20.4
RHH5272_R3644
52.1
Terminal effector memory CD8 T-cell nTPM: 13.4
Samples: 4
Max nTPM: 19.8
Min nTPM: 6.0
RHH5232_R3604
19.8
RHH5204_R3575
6.0
RHH5261_R3633
18.6
RHH5296_R3662
9.0
Vd2 gdTCR nTPM: 62.4
Samples: 4
Max nTPM: 83.4
Min nTPM: 17.9
RHH5234_R3606
77.2
RHH5206_R3577
17.9
RHH5263_R3635
83.4
RHH5298_R3664
70.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
