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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
45.9
nTPM
HPA Brain:
25.1
nTPM
GTEx:
45.9
nTPM
FANTOM5:
16.4
Scaled Tags Per Million
Mouse:
52.8
nTPM
Allen mouse:
3.1
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
25.1
Sample id
Sample description
nTPM
Amygdala nTPM: 25.1
2814
Male, age 76, right hemisphere
30.0
2695
Female, age 67, right hemisphere
29.4
1987
Female, age 91, left hemisphere
22.9
2517
Female, age 94, left hemisphere
22.7
2514
Male, age 75, right hemisphere
20.6
Basal amygdala nTPM: 19.3
2609
Male, age 75, right hemisphere
24.1
2110
Male, age 80, left hemisphere
21.6
1955
Male, age 76, both hemispheres
20.8
2685
Female, age 94, left hemisphere
18.6
2243
Female, age 91, right hemisphere
17.1
2827
Female, age 67, right hemisphere
13.6
Central amygdala nTPM: 24.0
2826
Female, age 94, left hemisphere
33.4
1905
Male, age 76, both hemispheres
27.3
2515
Male, age 75, right hemisphere
24.4
2239
Male, age 80, left hemisphere
19.7
2701
Female, age 91, right hemisphere
15.3
Corticomedial amygdala nTPM: 17.5
2428
Male, age 75, right hemisphere
22.9
2829
Male, age 80, left hemisphere
20.7
2240
Male, age 76, both hemispheres
16.5
2429
Female, age 94, left hemisphere
16.3
2242
Female, age 91, right hemisphere
15.2
2535
Female, age 67, right hemisphere
13.2
Lateral amygdala nTPM: 20.2
1883
Male, age 76, both hemispheres
25.0
2516
Male, age 75, right hemisphere
24.1
2534
Female, age 94, left hemisphere
22.8
2255
Female, age 91, right hemisphere
17.0
2256
Male, age 80, left hemisphere
16.3
2830
Female, age 67, right hemisphere
16.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
45.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 45.9
Samples: 152
Max nTPM: 170.3
Min nTPM: 18.6
Std nTPM: 18.7
Median nTPM: 43.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
170.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
119.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
117.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
107.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
99.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
93.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
72.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
71.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
67.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
66.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
66.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
64.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
62.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
61.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
61.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
59.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
59.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
58.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
57.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
57.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
57.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
57.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
57.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
56.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
55.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
55.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
54.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
54.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
54.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
53.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
53.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
52.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
51.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
51.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
51.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
50.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
50.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
50.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
50.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
50.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
49.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
49.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
49.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
49.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
48.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
48.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
48.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
48.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
47.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
47.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
47.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
47.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
47.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
47.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
46.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
46.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
46.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
46.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
46.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
45.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
45.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
45.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
45.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
45.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
45.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
45.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
45.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
44.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
44.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
44.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
43.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
43.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
43.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
43.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
43.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
43.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
43.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
42.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
42.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
42.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
42.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
42.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
42.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
42.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
42.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
41.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
41.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
41.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
40.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
40.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
40.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
40.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
40.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
40.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
39.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
39.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
39.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
39.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
39.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
39.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
38.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
38.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
38.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
38.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
38.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
38.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
38.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
38.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
38.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
37.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
37.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
37.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
37.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
37.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
37.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
36.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
36.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
35.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
35.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
35.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
35.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
35.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
34.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
34.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
34.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
34.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
34.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
33.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
33.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
32.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
31.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
30.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
30.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
30.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
30.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
29.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
28.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
27.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
27.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
26.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
26.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
26.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
26.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
26.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
25.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
24.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
23.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
23.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
22.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
19.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
19.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
18.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
52.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 52.8
Samples: 4
Max nTPM: 58.7
Min nTPM: 48.2
Sample A
Male
54.4
Sample B
Male
49.9
Sample C
Female
58.7
Sample D
Female
48.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
