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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
141.4
nTPM
Monaco:
140.1
nTPM
Schmiedel:
31.5
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
141.4
HPA sample
nTPM
gdT-cell nTPM: 86.3
Samples: 6
Max nTPM: 112.0
Min nTPM: 73.5
P10809_1007
79.7
P10809_1022
90.0
P10809_1041
74.7
P10809_1060
88.0
P10809_1077
73.5
P10809_1098
112.0
MAIT T-cell nTPM: 121.8
Samples: 6
Max nTPM: 148.0
Min nTPM: 79.8
P10809_1006
79.8
P10809_1024
137.9
P10809_1043
110.9
P10809_1062
121.6
P10809_1083
132.4
P10809_1097
148.0
Memory CD4 T-cell nTPM: 121.0
Samples: 6
Max nTPM: 150.6
Min nTPM: 97.9
P10809_1014
97.9
P10809_1026
120.3
P10809_1045
103.3
P10809_1064
117.8
P10809_1086
136.3
P10809_1113
150.6
Memory CD8 T-cell nTPM: 100.1
Samples: 5
Max nTPM: 122.2
Min nTPM: 75.6
P10809_1012
75.6
P10809_1027
91.3
P10809_1046
92.9
P10809_1065
118.3
P10809_1111
122.2
Naive CD4 T-cell nTPM: 130.7
Samples: 6
Max nTPM: 144.7
Min nTPM: 112.2
P10809_1015
127.6
P10809_1030
132.6
P10809_1049
112.2
P10809_1068
136.4
P10809_1085
130.5
P10809_1112
144.7
Naive CD8 T-cell nTPM: 111.9
Samples: 6
Max nTPM: 132.2
Min nTPM: 82.1
P10809_1016
124.1
P10809_1031
115.9
P10809_1050
82.1
P10809_1069
120.7
P10809_1087
96.4
P10809_1110
132.2
T-reg nTPM: 141.4
Samples: 6
Max nTPM: 168.1
Min nTPM: 113.9
P10809_1018
121.5
P10809_1037
149.0
P10809_1056
113.9
P10809_1075
134.8
P10809_1094
168.1
P10809_1106
161.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
140.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 104.3
Samples: 4
Max nTPM: 145.4
Min nTPM: 76.6
RHH5202_R3573
105.1
RHH5230_R3602
90.1
RHH5259_R3631
76.6
RHH5288_R3660
145.4
Effector memory CD8 T-cell nTPM: 78.2
Samples: 4
Max nTPM: 107.3
Min nTPM: 49.8
RHH5203_R3574
83.4
RHH5231_R3603
107.3
RHH5260_R3632
72.3
RHH5289_R3661
49.8
MAIT T-cell nTPM: 106.9
Samples: 4
Max nTPM: 147.0
Min nTPM: 84.4
RHH5233_R3605
106.3
RHH5205_R3576
84.4
RHH5262_R3634
90.0
RHH5297_R3663
147.0
Memory CD4 T-cell TFH nTPM: 140.1
Samples: 4
Max nTPM: 185.0
Min nTPM: 92.1
RHH5300_R3666
140.1
RHH5236_R3608
185.0
RHH5265_R3637
92.1
RHH5208_R3579
143.1
Memory CD4 T-cell Th1 nTPM: 114.0
Samples: 4
Max nTPM: 172.6
Min nTPM: 80.8
RHH5210_R3581
97.6
RHH5302_R3668
172.6
RHH5238_R3610
104.9
RHH5267_R3639
80.8
Memory CD4 T-cell Th1/Th17 nTPM: 124.7
Samples: 4
Max nTPM: 177.3
Min nTPM: 80.6
RHH5303_R3669
177.3
RHH5211_R3582
156.9
RHH5239_R3611
80.6
RHH5268_R3640
83.8
Memory CD4 T-cell Th17 nTPM: 92.2
Samples: 4
Max nTPM: 135.3
Min nTPM: 64.9
RHH5304_R3670
89.7
RHH5212_R3583
135.3
RHH5240_R3612
78.9
RHH5269_R3641
64.9
Memory CD4 T-cell Th2 nTPM: 89.4
Samples: 4
Max nTPM: 109.1
Min nTPM: 69.7
RHH5305_R3671
94.5
RHH5213_R3584
84.2
RHH5241_R3613
109.1
RHH5270_R3642
69.7
Naive CD4 T-cell nTPM: 133.0
Samples: 4
Max nTPM: 187.0
Min nTPM: 90.1
RHH5306_R3672
146.9
RHH5214_R3585
187.0
RHH5242_R3614
108.1
RHH5271_R3643
90.1
Naive CD8 T-cell nTPM: 109.2
Samples: 4
Max nTPM: 137.1
Min nTPM: 80.5
RHH5201_R3572
108.4
RHH5229_R3601
80.5
RHH5258_R3630
137.1
RHH5287_R3659
110.7
Non-Vd2 gdTCR nTPM: 72.3
Samples: 4
Max nTPM: 81.9
Min nTPM: 57.5
RHH5235_R3607
57.5
RHH5264_R3636
81.9
RHH5207_R3578
69.5
RHH5299_R3665
80.4
T-reg nTPM: 118.3
Samples: 4
Max nTPM: 163.9
Min nTPM: 72.2
RHH5301_R3667
146.6
RHH5237_R3609
163.9
RHH5266_R3638
72.2
RHH5209_R3580
90.5
Terminal effector memory CD4 T-cell nTPM: 87.4
Samples: 2
Max nTPM: 105.4
Min nTPM: 69.4
RHH5243_R3615
69.4
RHH5272_R3644
105.4
Terminal effector memory CD8 T-cell nTPM: 85.0
Samples: 4
Max nTPM: 114.9
Min nTPM: 68.4
RHH5232_R3604
70.6
RHH5204_R3575
86.2
RHH5261_R3633
68.4
RHH5296_R3662
114.9
Vd2 gdTCR nTPM: 130.2
Samples: 4
Max nTPM: 172.1
Min nTPM: 88.1
RHH5234_R3606
109.1
RHH5206_R3577
151.5
RHH5263_R3635
88.1
RHH5298_R3664
172.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
