HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:238.0 nTPM
HPA Brain:253.3 nTPM
GTEx:238.0 nTPM
FANTOM5:212.8 Scaled Tags Per Million
Pig:227.8 nTPM
Mouse:234.8 nTPM
Allen mouse:25.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043640Antibody HPA046280
Glial cells Not detectedNot detected
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 253.3
Sample id Sample description nTPM
Hippocampus
nTPM: 253.3
2529 Female, age 94, left hemisphere 399.8
1855 Male, age 76, left hemisphere 263.7
2148 Female, age 91, left hemisphere 227.4
2621 Female, age 67, right hemisphere 224.8
1898 Male, age 80, left hemisphere 214.8
1911 Female, age 85, right hemisphere 189.5
Dentate gyrus
nTPM: 198.8
2010 Male, age 76, both hemispheres 264.9
2246 Female, age 85, both hemispheres 236.2
2528 Male, age 74, both hemispheres 192.3
1927 Female, age 91, both hemispheres 180.7
2531 Female, age 67, both hemispheres 170.3
2530 Female, age 94, left hemisphere 148.4
Entorhinal gyrus
nTPM: 209.2
1938 Female, age 85, left hemisphere 250.6
2117 Female, age 91, right hemisphere 233.3
1787 Male, age 76, left hemisphere 229.7
2686 Male, age 75, right hemisphere 225.9
2764 Male, age 80, right hemisphere 176.0
2613 Female, age 94, left hemisphere 139.6
Hippocampus, CA1
nTPM: 218.8
2527 Male, age 74, both hemispheres 338.2
2082 Female, age 91, right hemisphere 227.6
2045 Male, age 76, both hemispheres 188.8
2749 Male, age 80, left hemisphere 181.3
1873 Female, age 85, both hemispheres 158.2
Hippocampus, CA2
nTPM: 205.3
2249 Male, age 74, both hemispheres 286.6
2113 Female, age 91, right hemisphere 241.8
2437 Female, age 94, left hemisphere 218.8
1940 Female, age 85, left hemisphere 173.0
1892 Male, age 76, both hemispheres 168.2
1963 Male, age 80, left hemisphere 143.6
Hippocampus, CA3
nTPM: 189.7
2137 Male, age 80, left hemisphere 218.4
2861 Female, age 67, both hemispheres 213.9
2436 Male, age 74, both hemispheres 208.3
1867 Male, age 76, both hemispheres 207.4
1891 Female, age 85, both hemispheres 165.6
2620 Female, age 94, left hemisphere 124.5
Parahippocampal cortex
nTPM: 245.0
2250 Female, age 67, right hemisphere 395.1
2692 Male, age 74, both hemispheres 290.2
1933 Female, age 85, both hemispheres 273.0
2245 Female, age 91, both hemispheres 267.4
2622 Female, age 67, right hemisphere 245.4
1990 Female, age 91, right hemisphere 224.3
2532 Female, age 72, left hemisphere 195.3
2693 Female, age 94, both hemispheres 190.1
1850 Male, age 80, both hemispheres 185.3
2018 Male, age 76, both hemispheres 184.3
Perirhinal gyrus
nTPM: 212.4
1847 Female, age 91, left hemisphere 262.0
2521 Female, age 94, right hemisphere 254.3
1794 Male, age 80, right hemisphere 200.4
1841 Female, age 85, right hemisphere 188.9
2848 Male, age 76, right hemisphere 156.3
Subiculum
nTPM: 231.3
2438 Female, age 94, left hemisphere 331.1
2619 Male, age 74, both hemispheres 254.2
2729 Female, age 91, right hemisphere 215.2
1977 Female, age 85, both hemispheres 204.5
2042 Male, age 76, both hemispheres 194.3
1901 Male, age 80, both hemispheres 188.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 238.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 238.0
Samples: 197

Max nTPM: 1338.9
Min nTPM: 45.0
Std nTPM: 160.3
Median nTPM: 200.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1338.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 1003.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 708.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 676.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 664.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 643.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 630.5
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 590.8
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 588.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 584.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 551.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 212.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 212.8
FF:10153-102I9 76 years, female 231.4
FF:10169-103B7 60 years, female 194.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 227.8
Pig sample Sample description nTPM
Subiculum
nTPM: 227.8
Samples: 4

Max nTPM: 307.8
Min nTPM: 173.0
Sample A Female 221.3
Sample B Female 209.1
Sample C Male 307.8
Sample D Male 173.0
Dorsal hippocampus
nTPM: 168.1
Samples: 4

Max nTPM: 249.0
Min nTPM: 117.1
Sample A Female 165.1
Sample B Female 141.3
Sample C Male 249.0
Sample D Male 117.1
Entorhinal cortex
nTPM: 169.0
Samples: 4

Max nTPM: 291.8
Min nTPM: 114.4
Sample A Female 134.1
Sample B Female 135.8
Sample C Male 291.8
Sample D Male 114.4
Ventral hippocampus
nTPM: 197.5
Samples: 4

Max nTPM: 363.9
Min nTPM: 130.3
Sample A Female 134.0
Sample B Female 161.8
Sample C Male 363.9
Sample D Male 130.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 234.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 192.0
Samples: 4

Max nTPM: 228.8
Min nTPM: 148.6
Sample A Male 182.0
Sample B Male 148.6
Sample C Female 228.8
Sample D Female 208.5
Hippocampal formation
nTPM: 234.8
Samples: 4

Max nTPM: 251.7
Min nTPM: 226.6
Sample A Male 231.2
Sample B Male 226.6
Sample C Female 229.8
Sample D Female 251.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.6
74819689 Antisense, RP_060315_02_H05, Mouse strain C57BL/6J (56 days, male) 27.0
69854163 Antisense, RP_050324_04_C01, Mouse strain C57BL/6J (56 days, male) 25.4
69838608 Antisense, RP_050310_02_C05, Mouse strain C57BL/6J (56 days, male) 24.5

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