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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
466.0
nTPM
FANTOM5:
407.1
Scaled Tags Per Million
Pig:
203.3
nTPM
Allen mouse:
20.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
466.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 339.7
2301
Female, age 85, both hemispheres
463.3
2090
Male, age 80, both hemispheres
320.9
1984
Male, age 76, both hemispheres
312.1
2188
Female, age 91, both hemispheres
262.6
Dorsal cochlear nucleus nTPM: 321.7
2187
Female, age 91, both hemispheres
439.0
2058
Male, age 76, both hemispheres
381.4
2802
Male, age 74, right hemisphere
296.5
2370
Male, age 61, both hemispheres
292.6
2378
Male, age 80, both hemispheres
198.8
Dorsal tegmental nucleus nTPM: 466.0
2358
Male, age 61, both hemispheres
618.0
2083
Male, age 80, both hemispheres
491.2
1936
Male, age 76, left hemisphere
379.9
2326
Male, age 74, both hemispheres
374.9
Dorsolateral tegmental area nTPM: 422.6
2751
Female, age 85, both hemispheres
559.4
2337
Male, age 61, both hemispheres
462.0
2654
Male, age 80, both hemispheres
425.8
2141
Male, age 76, both hemispheres
341.8
2360
Male, age 74, both hemispheres
324.2
Kolliker-Fuse nucleus nTPM: 412.5
2315
Male, age 76, right hemisphere
555.8
2163
Male, age 80, both hemispheres
426.4
2793
Female, age 91, left hemisphere
255.4
Lateral lemniscal nuclei nTPM: 215.3
2169
Male, age 76, both hemispheres
258.2
2746
Female, age 85, left hemisphere
216.8
2036
Male, age 80, both hemispheres
207.0
2320
Female, age 91, left hemisphere
203.4
2453
Male, age 74, right hemisphere
191.1
Lateral parabrachial nucleus nTPM: 304.1
2792
Male, age 76, both hemispheres
353.2
2790
Male, age 61, both hemispheres
341.8
2013
Male, age 80, both hemispheres
300.4
2139
Female, age 85, right hemisphere
221.2
Lateral vestibular nucleus nTPM: 397.0
2311
Male, age 80, both hemispheres
421.7
2184
Male, age 76, both hemispheres
372.3
Locus coeruleus nTPM: 450.1
2123
Female, age 91, both hemispheres
528.7
2014
Male, age 55, unknown
489.1
2720
Male, age 74, both hemispheres
455.6
1980
Male, age 76, both hemispheres
432.5
2317
Female, age 72, unknown
430.8
2788
Male, age 74, unknown
415.8
2162
Male, age 80, both hemispheres
398.1
Medial parabrachial nucleus nTPM: 451.3
2170
Female, age 91, both hemispheres
582.0
2463
Female, age 85, right hemisphere
517.9
2156
Male, age 61, both hemispheres
414.5
2786
Male, age 76, both hemispheres
372.2
2854
Male, age 80, both hemispheres
369.8
Medial periolivary nuclei nTPM: 240.5
2081
Male, age 80, both hemispheres
288.0
2791
Male, age 74, right hemisphere
268.1
2063
Male, age 76, both hemispheres
261.6
2458
Female, age 91, both hemispheres
213.4
2171
Female, age 85, both hemispheres
171.3
Motor facial nucleus nTPM: 232.8
2062
Male, age 76, both hemispheres
284.9
2795
Female, age 91, both hemispheres
255.3
2365
Male, age 74, right hemisphere
251.1
2126
Male, age 61, both hemispheres
213.7
2697
Female, age 85, both hemispheres
202.5
2327
Male, age 80, both hemispheres
189.4
Motor trigeminal nucleus nTPM: 289.6
2309
Male, age 76, both hemispheres
344.8
2335
Male, age 61, both hemispheres
321.2
2321
Female, age 91, both hemispheres
293.0
2560
Male, age 74, both hemispheres
245.3
2079
Male, age 80, both hemispheres
244.0
Nuclei of the trapezoid body nTPM: 220.4
1983
Male, age 76, both hemispheres
297.4
2166
Male, age 80, both hemispheres
269.9
2368
Female, age 91, both hemispheres
222.4
2735
Female, age 85, both hemispheres
184.5
2159
Male, age 61, both hemispheres
127.7
Nucleus raphe magnus nTPM: 203.0
2051
Male, age 76, both hemispheres
275.0
2455
Male, age 74, both hemispheres
247.7
2328
Male, age 80, both hemispheres
234.1
2459
Female, age 91, both hemispheres
189.9
2172
Female, age 85, both hemispheres
139.1
2160
Male, age 61, both hemispheres
132.1
Paramedian reticular nucleus nTPM: 310.7
2057
Male, age 80, both hemispheres
413.4
2052
Male, age 76, both hemispheres
303.7
2050
Female, age 85, both hemispheres
280.9
2313
Male, age 61, both hemispheres
244.7
Pedunculopontine tegmental nucleus nTPM: 429.4
2334
Male, age 80, both hemispheres
489.8
2338
Male, age 61, both hemispheres
450.7
1921
Female, age 85, both hemispheres
347.7
Pontine nuclei nTPM: 231.9
2454
Male, age 74, left hemisphere
288.8
2109
Female, age 72, unknown
261.7
1863
Male, age 55, unknown
254.7
2115
Male, age 80, left hemisphere
249.2
2319
Female, age 91, both hemispheres
238.8
1968
Male, age 76, left hemisphere
238.6
2787
Female, age 85, both hemispheres
211.5
2727
Male, age 61, right hemisphere
111.9
Pontine raphe nucleus nTPM: 301.2
2853
Male, age 76, midline
344.8
2122
Female, age 85, midline
257.6
Posteroventral cochlear nucleus nTPM: 307.5
2070
Male, age 76, both hemispheres
387.9
2341
Male, age 80, both hemispheres
377.9
2371
Male, age 61, both hemispheres
286.8
2752
Female, age 85, both hemispheres
258.3
2135
Female, age 91, both hemispheres
226.4
Principal sensory trigeminal nucleus nTPM: 261.1
2324
Male, age 76, both hemispheres
418.6
2367
Female, age 91, left hemisphere
239.5
2008
Male, age 80, left hemisphere
237.5
2158
Male, age 61, both hemispheres
148.6
Reticular pontine nucleus, caudal nTPM: 260.5
2559
Male, age 74, both hemispheres
329.3
2092
Male, age 76, both hemispheres
306.8
2457
Female, age 91, both hemispheres
221.4
2332
Male, age 80, right hemisphere
184.5
Reticular pontine nucleus, oral nTPM: 331.5
1939
Male, age 80, both hemispheres
485.7
2167
Male, age 76, both hemispheres
378.9
2012
Female, age 85, both hemispheres
322.7
2361
Male, age 74, both hemispheres
301.3
2366
Female, age 91, both hemispheres
168.6
Reticulotegmental nucleus nTPM: 318.4
2322
Female, age 91, both hemispheres
368.1
2333
Male, age 80, both hemispheres
316.6
2325
Male, age 76, both hemispheres
301.0
2452
Male, age 74, both hemispheres
287.8
Spinal trigeminal nucleus, oral nTPM: 318.3
2164
Male, age 80, both hemispheres
344.9
1978
Male, age 76, both hemispheres
308.5
2737
Female, age 85, both hemispheres
301.5
Subcoeruleus area nTPM: 396.6
2369
Female, age 85, left hemisphere
554.2
2323
Female, age 91, left hemisphere
446.7
1958
Male, age 80, both hemispheres
373.1
2451
Male, age 74, both hemispheres
334.6
2089
Male, age 76, left hemisphere
274.4
Superior olive nTPM: 232.6
2364
Male, age 74, right hemisphere
289.2
2329
Male, age 80, right hemisphere
249.6
2020
Male, age 76, both hemispheres
244.5
2561
Female, age 91, both hemispheres
193.0
1875
Female, age 85, both hemispheres
186.6
Ventral periolivary nuclei nTPM: 204.9
2165
Male, age 80, both hemispheres
235.8
2023
Male, age 76, both hemispheres
220.4
2130
Female, age 85, both hemispheres
192.6
2794
Female, age 91, left hemisphere
170.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 293.2
2359
Male, age 61, both hemispheres
501.0
2840
Female, age 85, both hemispheres
298.9
2161
Male, age 80, both hemispheres
252.8
1959
Male, age 76, both hemispheres
246.5
2456
Female, age 91, both hemispheres
230.4
2449
Male, age 74, both hemispheres
229.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
203.3
Pig sample
Sample description
nTPM
Pons nTPM: 203.3
Samples: 4
Max nTPM: 335.7
Min nTPM: 141.7
Sample A
Female
141.7
Sample B
Female
171.0
Sample C
Male
335.7
Sample D
Male
164.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
