HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:102.6 nTPM
HPA Brain:93.0 nTPM
GTEx:102.6 nTPM
FANTOM5:126.8 Scaled Tags Per Million
Pig:146.7 nTPM
Mouse:299.4 nTPM
Allen mouse:15.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023840Antibody CAB012245
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 93.0
Sample id Sample description nTPM
Hippocampus
nTPM: 78.6
1898 Male, age 80, left hemisphere 108.6
1855 Male, age 76, left hemisphere 80.1
1911 Female, age 85, right hemisphere 78.2
2148 Female, age 91, left hemisphere 73.1
2621 Female, age 67, right hemisphere 69.4
2529 Female, age 94, left hemisphere 62.0
Dentate gyrus
nTPM: 79.6
2010 Male, age 76, both hemispheres 104.5
1927 Female, age 91, both hemispheres 99.0
2528 Male, age 74, both hemispheres 77.3
2246 Female, age 85, both hemispheres 77.1
2530 Female, age 94, left hemisphere 67.8
2531 Female, age 67, both hemispheres 51.6
Entorhinal gyrus
nTPM: 58.2
1787 Male, age 76, left hemisphere 75.3
1938 Female, age 85, left hemisphere 72.9
2117 Female, age 91, right hemisphere 67.5
2764 Male, age 80, right hemisphere 53.5
2686 Male, age 75, right hemisphere 40.9
2613 Female, age 94, left hemisphere 39.2
Hippocampus, CA1
nTPM: 93.0
2749 Male, age 80, left hemisphere 136.7
1873 Female, age 85, both hemispheres 106.8
2045 Male, age 76, both hemispheres 89.7
2527 Male, age 74, both hemispheres 70.6
2082 Female, age 91, right hemisphere 61.4
Hippocampus, CA2
nTPM: 81.3
1963 Male, age 80, left hemisphere 101.0
1892 Male, age 76, both hemispheres 97.6
2249 Male, age 74, both hemispheres 84.6
1940 Female, age 85, left hemisphere 71.7
2437 Female, age 94, left hemisphere 66.8
2113 Female, age 91, right hemisphere 66.1
Hippocampus, CA3
nTPM: 78.7
2137 Male, age 80, left hemisphere 103.2
1867 Male, age 76, both hemispheres 100.5
2436 Male, age 74, both hemispheres 82.0
1891 Female, age 85, both hemispheres 80.7
2620 Female, age 94, left hemisphere 55.0
2861 Female, age 67, both hemispheres 50.7
Parahippocampal cortex
nTPM: 62.6
2018 Male, age 76, both hemispheres 85.5
1850 Male, age 80, both hemispheres 76.3
1990 Female, age 91, right hemisphere 69.9
1933 Female, age 85, both hemispheres 67.9
2250 Female, age 67, right hemisphere 67.2
2245 Female, age 91, both hemispheres 61.8
2693 Female, age 94, both hemispheres 61.5
2692 Male, age 74, both hemispheres 49.5
2532 Female, age 72, left hemisphere 46.4
2622 Female, age 67, right hemisphere 40.6
Perirhinal gyrus
nTPM: 70.1
1847 Female, age 91, left hemisphere 85.7
1841 Female, age 85, right hemisphere 71.2
1794 Male, age 80, right hemisphere 69.8
2521 Female, age 94, right hemisphere 67.1
2848 Male, age 76, right hemisphere 56.6
Subiculum
nTPM: 70.0
2042 Male, age 76, both hemispheres 92.0
2729 Female, age 91, right hemisphere 78.0
1901 Male, age 80, both hemispheres 74.8
1977 Female, age 85, both hemispheres 63.9
2619 Male, age 74, both hemispheres 58.4
2438 Female, age 94, left hemisphere 53.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 102.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 102.6
Samples: 197

Max nTPM: 186.2
Min nTPM: 43.4
Std nTPM: 25.3
Median nTPM: 99.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 186.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 177.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 173.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 160.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 157.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 157.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 155.9
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 155.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 152.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 151.1
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 150.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 126.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 126.8
FF:10169-103B7 60 years, female 158.9
FF:10153-102I9 76 years, female 94.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 146.7
Pig sample Sample description nTPM
Subiculum
nTPM: 113.4
Samples: 4

Max nTPM: 150.6
Min nTPM: 95.8
Sample A Female 150.6
Sample B Female 104.2
Sample C Male 95.8
Sample D Male 102.9
Dorsal hippocampus
nTPM: 128.1
Samples: 4

Max nTPM: 149.8
Min nTPM: 112.0
Sample A Female 149.8
Sample B Female 128.7
Sample C Male 112.0
Sample D Male 121.7
Entorhinal cortex
nTPM: 146.7
Samples: 4

Max nTPM: 187.7
Min nTPM: 112.5
Sample A Female 152.8
Sample B Female 187.7
Sample C Male 133.7
Sample D Male 112.5
Ventral hippocampus
nTPM: 114.6
Samples: 4

Max nTPM: 131.8
Min nTPM: 94.1
Sample A Female 131.8
Sample B Female 94.1
Sample C Male 117.1
Sample D Male 115.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 299.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 211.6
Samples: 4

Max nTPM: 225.6
Min nTPM: 193.9
Sample A Male 212.2
Sample B Male 214.5
Sample C Female 225.6
Sample D Female 193.9
Hippocampal formation
nTPM: 299.4
Samples: 4

Max nTPM: 321.1
Min nTPM: 265.4
Sample A Male 314.2
Sample B Male 296.8
Sample C Female 321.1
Sample D Female 265.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.0
70744518 Antisense, RP_050725_02_B11, Mouse strain C57BL/6J (56 days, male) 16.1
68196966 Antisense, RP_040922_01_D02, Mouse strain C57BL/6J (56 days, male) 13.9

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