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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
113.5
nTPM
FANTOM5:
216.7
Scaled Tags Per Million
Pig:
121.1
nTPM
Allen mouse:
8.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
113.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 79.0
2188
Female, age 91, both hemispheres
83.8
2301
Female, age 85, both hemispheres
81.5
2090
Male, age 80, both hemispheres
76.8
1984
Male, age 76, both hemispheres
73.7
Dorsal cochlear nucleus nTPM: 82.4
2802
Male, age 74, right hemisphere
102.3
2378
Male, age 80, both hemispheres
85.5
2187
Female, age 91, both hemispheres
83.3
2370
Male, age 61, both hemispheres
76.5
2058
Male, age 76, both hemispheres
64.6
Dorsal tegmental nucleus nTPM: 78.3
2326
Male, age 74, both hemispheres
87.7
2358
Male, age 61, both hemispheres
87.0
1936
Male, age 76, left hemisphere
73.3
2083
Male, age 80, both hemispheres
65.2
Dorsolateral tegmental area nTPM: 88.7
2337
Male, age 61, both hemispheres
137.1
2360
Male, age 74, both hemispheres
95.6
2654
Male, age 80, both hemispheres
78.3
2751
Female, age 85, both hemispheres
74.9
2141
Male, age 76, both hemispheres
57.5
Kolliker-Fuse nucleus nTPM: 89.5
2315
Male, age 76, right hemisphere
129.4
2793
Female, age 91, left hemisphere
72.5
2163
Male, age 80, both hemispheres
66.5
Lateral lemniscal nuclei nTPM: 95.5
2036
Male, age 80, both hemispheres
120.9
2746
Female, age 85, left hemisphere
109.4
2169
Male, age 76, both hemispheres
108.7
2453
Male, age 74, right hemisphere
72.1
2320
Female, age 91, left hemisphere
66.3
Lateral parabrachial nucleus nTPM: 99.1
2139
Female, age 85, right hemisphere
117.4
2792
Male, age 76, both hemispheres
111.7
2013
Male, age 80, both hemispheres
100.0
2790
Male, age 61, both hemispheres
67.1
Lateral vestibular nucleus nTPM: 69.7
2311
Male, age 80, both hemispheres
75.2
2184
Male, age 76, both hemispheres
64.2
Locus coeruleus nTPM: 92.1
2014
Male, age 55, unknown
112.9
2720
Male, age 74, both hemispheres
99.1
2123
Female, age 91, both hemispheres
98.6
2317
Female, age 72, unknown
91.6
1980
Male, age 76, both hemispheres
84.5
2788
Male, age 74, unknown
84.0
2162
Male, age 80, both hemispheres
74.2
Medial parabrachial nucleus nTPM: 73.7
2854
Male, age 80, both hemispheres
98.7
2170
Female, age 91, both hemispheres
91.1
2786
Male, age 76, both hemispheres
63.1
2463
Female, age 85, right hemisphere
60.8
2156
Male, age 61, both hemispheres
54.8
Medial periolivary nuclei nTPM: 101.7
2171
Female, age 85, both hemispheres
122.5
2063
Male, age 76, both hemispheres
121.7
2791
Male, age 74, right hemisphere
108.6
2081
Male, age 80, both hemispheres
92.8
2458
Female, age 91, both hemispheres
63.0
Motor facial nucleus nTPM: 90.4
2062
Male, age 76, both hemispheres
115.4
2365
Male, age 74, right hemisphere
95.3
2697
Female, age 85, both hemispheres
93.9
2795
Female, age 91, both hemispheres
86.5
2327
Male, age 80, both hemispheres
79.4
2126
Male, age 61, both hemispheres
71.5
Motor trigeminal nucleus nTPM: 69.2
2079
Male, age 80, both hemispheres
90.5
2335
Male, age 61, both hemispheres
69.1
2560
Male, age 74, both hemispheres
68.9
2321
Female, age 91, both hemispheres
64.1
2309
Male, age 76, both hemispheres
53.5
Nuclei of the trapezoid body nTPM: 103.4
2735
Female, age 85, both hemispheres
130.6
2159
Male, age 61, both hemispheres
121.6
1983
Male, age 76, both hemispheres
114.4
2166
Male, age 80, both hemispheres
83.6
2368
Female, age 91, both hemispheres
66.6
Nucleus raphe magnus nTPM: 102.9
2160
Male, age 61, both hemispheres
138.7
2172
Female, age 85, both hemispheres
120.6
2051
Male, age 76, both hemispheres
109.7
2455
Male, age 74, both hemispheres
93.8
2328
Male, age 80, both hemispheres
83.2
2459
Female, age 91, both hemispheres
71.7
Paramedian reticular nucleus nTPM: 90.9
2050
Female, age 85, both hemispheres
121.6
2052
Male, age 76, both hemispheres
95.4
2313
Male, age 61, both hemispheres
77.3
2057
Male, age 80, both hemispheres
69.3
Pedunculopontine tegmental nucleus nTPM: 80.1
2338
Male, age 61, both hemispheres
104.3
2334
Male, age 80, both hemispheres
73.9
1921
Female, age 85, both hemispheres
62.2
Pontine nuclei nTPM: 113.5
1863
Male, age 55, unknown
171.9
2727
Male, age 61, right hemisphere
142.6
2787
Female, age 85, both hemispheres
130.6
2109
Female, age 72, unknown
122.9
1968
Male, age 76, left hemisphere
93.7
2115
Male, age 80, left hemisphere
85.5
2319
Female, age 91, both hemispheres
83.6
2454
Male, age 74, left hemisphere
77.2
Pontine raphe nucleus nTPM: 85.0
2122
Female, age 85, midline
104.8
2853
Male, age 76, midline
65.1
Posteroventral cochlear nucleus nTPM: 81.1
2341
Male, age 80, both hemispheres
97.2
2371
Male, age 61, both hemispheres
88.5
2135
Female, age 91, both hemispheres
77.0
2070
Male, age 76, both hemispheres
73.6
2752
Female, age 85, both hemispheres
69.3
Principal sensory trigeminal nucleus nTPM: 90.0
2158
Male, age 61, both hemispheres
116.8
2008
Male, age 80, left hemisphere
106.5
2367
Female, age 91, left hemisphere
72.9
2324
Male, age 76, both hemispheres
63.6
Reticular pontine nucleus, caudal nTPM: 80.0
2092
Male, age 76, both hemispheres
103.0
2332
Male, age 80, right hemisphere
78.7
2559
Male, age 74, both hemispheres
73.0
2457
Female, age 91, both hemispheres
65.4
Reticular pontine nucleus, oral nTPM: 78.5
2012
Female, age 85, both hemispheres
108.6
2361
Male, age 74, both hemispheres
86.2
1939
Male, age 80, both hemispheres
72.0
2366
Female, age 91, both hemispheres
63.6
2167
Male, age 76, both hemispheres
62.3
Reticulotegmental nucleus nTPM: 75.5
2325
Male, age 76, both hemispheres
83.6
2452
Male, age 74, both hemispheres
77.0
2333
Male, age 80, both hemispheres
72.1
2322
Female, age 91, both hemispheres
69.5
Spinal trigeminal nucleus, oral nTPM: 63.9
2164
Male, age 80, both hemispheres
69.7
2737
Female, age 85, both hemispheres
66.4
1978
Male, age 76, both hemispheres
55.5
Subcoeruleus area nTPM: 77.8
2089
Male, age 76, left hemisphere
84.9
1958
Male, age 80, both hemispheres
83.5
2451
Male, age 74, both hemispheres
81.2
2369
Female, age 85, left hemisphere
73.9
2323
Female, age 91, left hemisphere
65.6
Superior olive nTPM: 102.4
1875
Female, age 85, both hemispheres
148.7
2020
Male, age 76, both hemispheres
111.4
2364
Male, age 74, right hemisphere
102.3
2329
Male, age 80, right hemisphere
81.0
2561
Female, age 91, both hemispheres
68.8
Ventral periolivary nuclei nTPM: 104.0
2130
Female, age 85, both hemispheres
118.6
2023
Male, age 76, both hemispheres
117.4
2165
Male, age 80, both hemispheres
99.0
2794
Female, age 91, left hemisphere
81.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 99.6
2359
Male, age 61, both hemispheres
146.5
2161
Male, age 80, both hemispheres
103.3
1959
Male, age 76, both hemispheres
101.7
2840
Female, age 85, both hemispheres
95.2
2449
Male, age 74, both hemispheres
79.6
2456
Female, age 91, both hemispheres
71.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
121.1
Pig sample
Sample description
nTPM
Pons nTPM: 121.1
Samples: 4
Max nTPM: 148.4
Min nTPM: 97.5
Sample A
Female
119.0
Sample B
Female
97.5
Sample C
Male
119.3
Sample D
Male
148.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
