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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
111.5
nTPM
HPA Brain:
96.0
nTPM
GTEx:
111.5
nTPM
FANTOM5:
126.0
Scaled Tags Per Million
Pig:
113.1
nTPM
Mouse:
190.0
nTPM
Allen mouse:
7.0
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
96.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 66.0
2019
Male, age 18, unknown
100.5
1827
Male, age 72, unknown
80.9
2828
Female, age 72, unknown
79.3
2666
Male, age 74, left hemisphere
73.8
2411
Female, age 72, unknown
66.8
1870
Female, age 42, unknown
60.7
1830
Male, age 51, unknown
53.7
2586
Male, age 75, left hemisphere
49.8
1833
Male, age 53, unknown
48.2
2219
Male, age 76, both hemispheres
46.3
Dorsal raphe nucleus nTPM: 79.0
2298
Female, age 72, unknown
98.1
2047
Male, age 72, unknown
79.9
1828
Male, age 53, unknown
75.4
2750
Male, age 76, both hemispheres
72.3
2016
Female, age 72, unknown
69.2
Inferior colliculus nTPM: 57.0
2097
Female, age 72, unknown
75.7
1890
Male, age 53, unknown
61.2
1848
Female, age 42, unknown
51.5
2849
Male, age 72, unknown
39.4
Median raphe nucleus nTPM: 74.3
2220
Male, age 76, midline
74.3
Periaquaductal grey, anterior nTPM: 79.7
2502
Female, age 75, unknown
85.3
1795
Male, age 51, unknown
82.4
1947
Male, age 18, unknown
71.3
Periaquaductal grey, dorsal nTPM: 64.9
2850
Male, age 76, both hemispheres
80.0
1831
Male, age 72, unknown
64.6
2464
Female, age 72, unknown
61.5
1840
Male, age 53, unknown
53.3
Periaquaductal grey, lateral nTPM: 72.4
2272
Male, age 74, both hemispheres
78.8
2140
Male, age 76, both hemispheres
71.1
2053
Male, age 18, unknown
67.2
Pretectal area nTPM: 83.4
1816
Male, age 51, unknown
109.8
1817
Female, age 42, unknown
102.9
2007
Male, age 72, unknown
98.9
2273
Male, age 74, both hemispheres
93.9
1944
Female, age 72, unknown
88.8
1815
Male, age 53, unknown
83.4
2667
Female, age 75, unknown
80.1
2224
Female, age 72, unknown
79.4
2316
Male, age 76, right hemisphere
65.7
2825
Male, age 18, unknown
57.8
2407
Male, age 75, both hemispheres
56.7
Red nucleus nTPM: 77.9
1821
Female, age 72, unknown
119.6
1865
Male, age 51, unknown
85.0
2823
Male, age 76, right hemisphere
82.4
1954
Female, age 42, unknown
80.7
1904
Male, age 53, unknown
80.2
2785
Male, age 18, unknown
79.8
2725
Female, age 75, unknown
77.5
2503
Female, age 72, unknown
73.2
2769
Male, age 72, unknown
72.0
2227
Male, age 72, unknown
71.0
2588
Male, age 74, left hemisphere
58.3
2584
Male, age 75, left hemisphere
54.7
Substantia nigra nTPM: 96.0
1941
Male, age 53, unknown
128.2
1916
Female, age 42, unknown
109.7
1851
Male, age 51, unknown
109.1
2241
Male, age 72, unknown
102.2
2409
Female, age 72, unknown
101.5
2665
Male, age 74, both hemispheres
89.9
1889
Female, age 72, unknown
87.2
2590
Female, age 75, unknown
80.9
2699
Male, age 18, unknown
75.8
2583
Male, age 75, right hemisphere
75.2
Superior colliculus nTPM: 69.5
2261
Male, age 18, unknown
87.8
2587
Male, age 74, left hemisphere
85.3
2087
Female, age 72, unknown
81.0
1796
Male, age 53, unknown
76.9
2668
Female, age 75, unknown
74.6
1913
Female, age 42, unknown
66.5
1995
Male, age 72, unknown
64.5
2664
Male, age 75, both hemispheres
57.6
1839
Male, age 51, unknown
51.3
1895
Male, age 76, right hemisphere
49.3
Ventral tegmental area nTPM: 83.2
2410
Female, age 72, unknown
97.1
1915
Female, age 42, unknown
86.5
2218
Male, age 76, both hemispheres
86.3
2223
Female, age 72, unknown
80.1
2021
Male, age 53, unknown
76.0
1942
Male, age 51, unknown
73.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
111.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 111.5
Samples: 139
Max nTPM: 240.9
Min nTPM: 64.8
Std nTPM: 25.0
Median nTPM: 109.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
240.9
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
181.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
180.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
172.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
164.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
161.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
160.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
159.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
158.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
152.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
146.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
146.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
146.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
143.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
138.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
137.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
136.9
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
134.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
133.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
133.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
132.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
131.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
131.0
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
129.8
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
129.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
128.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
128.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
127.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
127.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
126.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
125.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
124.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
124.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
123.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
123.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
122.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
122.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
122.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
121.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
120.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
119.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
119.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
119.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
118.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
116.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
115.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
115.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
115.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
114.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
114.5
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
114.5
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
113.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
113.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
113.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
113.4
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
112.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
112.5
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
112.2
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
112.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
111.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
110.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
110.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
110.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
110.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
110.5
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
110.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
110.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
110.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
109.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
109.2
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
107.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
106.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
105.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
105.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
105.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
105.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
104.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
104.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
104.6
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
103.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
103.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
103.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
102.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
102.4
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
102.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
102.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
101.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
101.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
101.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
101.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
100.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
100.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
100.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
100.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
99.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
99.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
99.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
98.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
98.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
98.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
98.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
97.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
96.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
96.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
95.9
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
95.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
95.3
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
94.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
94.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
94.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
93.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
92.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
92.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
91.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
91.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
89.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
89.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
89.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
88.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
88.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
87.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
87.1
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
87.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
86.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
85.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
84.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
82.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
82.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
81.8
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
80.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
80.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
77.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
75.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
75.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
73.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
72.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
72.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
68.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
64.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
190.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 190.0
Samples: 4
Max nTPM: 198.8
Min nTPM: 183.2
Sample A
Male
186.9
Sample B
Male
198.8
Sample C
Female
183.2
Sample D
Female
191.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.