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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
178.6
nTPM
Monaco:
343.7
nTPM
Schmiedel:
104.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
178.6
HPA sample
nTPM
gdT-cell nTPM: 132.8
Samples: 6
Max nTPM: 163.6
Min nTPM: 107.2
P10809_1007
115.5
P10809_1022
163.6
P10809_1041
141.4
P10809_1060
107.2
P10809_1077
146.4
P10809_1098
122.6
MAIT T-cell nTPM: 178.6
Samples: 6
Max nTPM: 199.9
Min nTPM: 139.6
P10809_1006
182.4
P10809_1024
193.0
P10809_1043
139.6
P10809_1062
199.9
P10809_1083
172.5
P10809_1097
184.0
Memory CD4 T-cell nTPM: 93.3
Samples: 6
Max nTPM: 136.4
Min nTPM: 66.4
P10809_1014
66.4
P10809_1026
78.5
P10809_1045
87.1
P10809_1064
93.2
P10809_1086
136.4
P10809_1113
98.1
Memory CD8 T-cell nTPM: 116.1
Samples: 5
Max nTPM: 127.0
Min nTPM: 102.3
P10809_1012
102.3
P10809_1027
126.0
P10809_1046
111.5
P10809_1065
127.0
P10809_1111
113.6
Naive CD4 T-cell nTPM: 50.2
Samples: 6
Max nTPM: 81.0
Min nTPM: 33.3
P10809_1015
33.3
P10809_1030
55.3
P10809_1049
55.4
P10809_1068
41.7
P10809_1085
81.0
P10809_1112
34.6
Naive CD8 T-cell nTPM: 83.1
Samples: 6
Max nTPM: 155.4
Min nTPM: 41.1
P10809_1016
41.1
P10809_1031
79.3
P10809_1050
75.8
P10809_1069
101.2
P10809_1087
155.4
P10809_1110
45.8
T-reg nTPM: 129.1
Samples: 6
Max nTPM: 157.0
Min nTPM: 83.8
P10809_1018
83.8
P10809_1037
141.8
P10809_1056
131.9
P10809_1075
121.6
P10809_1094
157.0
P10809_1106
138.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
343.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 135.1
Samples: 4
Max nTPM: 183.1
Min nTPM: 96.9
RHH5202_R3573
183.1
RHH5230_R3602
152.0
RHH5259_R3631
96.9
RHH5288_R3660
108.2
Effector memory CD8 T-cell nTPM: 241.2
Samples: 4
Max nTPM: 314.3
Min nTPM: 172.4
RHH5203_R3574
314.3
RHH5231_R3603
209.0
RHH5260_R3632
172.4
RHH5289_R3661
269.1
MAIT T-cell nTPM: 343.7
Samples: 4
Max nTPM: 409.1
Min nTPM: 281.1
RHH5233_R3605
329.3
RHH5205_R3576
409.1
RHH5262_R3634
355.4
RHH5297_R3663
281.1
Memory CD4 T-cell TFH nTPM: 121.9
Samples: 4
Max nTPM: 135.0
Min nTPM: 107.6
RHH5300_R3666
112.8
RHH5236_R3608
135.0
RHH5265_R3637
107.6
RHH5208_R3579
132.0
Memory CD4 T-cell Th1 nTPM: 124.3
Samples: 4
Max nTPM: 139.2
Min nTPM: 115.4
RHH5210_R3581
115.4
RHH5302_R3668
125.3
RHH5238_R3610
117.2
RHH5267_R3639
139.2
Memory CD4 T-cell Th1/Th17 nTPM: 184.2
Samples: 4
Max nTPM: 261.0
Min nTPM: 135.2
RHH5303_R3669
190.0
RHH5211_R3582
261.0
RHH5239_R3611
150.4
RHH5268_R3640
135.2
Memory CD4 T-cell Th17 nTPM: 153.8
Samples: 4
Max nTPM: 192.8
Min nTPM: 124.8
RHH5304_R3670
172.4
RHH5212_R3583
192.8
RHH5240_R3612
125.2
RHH5269_R3641
124.8
Memory CD4 T-cell Th2 nTPM: 135.4
Samples: 4
Max nTPM: 166.6
Min nTPM: 105.7
RHH5305_R3671
105.7
RHH5213_R3584
166.6
RHH5241_R3613
152.7
RHH5270_R3642
116.5
Naive CD4 T-cell nTPM: 83.5
Samples: 4
Max nTPM: 103.2
Min nTPM: 73.5
RHH5306_R3672
73.5
RHH5214_R3585
103.2
RHH5242_R3614
82.9
RHH5271_R3643
74.4
Naive CD8 T-cell nTPM: 76.1
Samples: 4
Max nTPM: 102.1
Min nTPM: 46.1
RHH5201_R3572
102.1
RHH5229_R3601
46.1
RHH5258_R3630
100.4
RHH5287_R3659
55.7
Non-Vd2 gdTCR nTPM: 206.2
Samples: 4
Max nTPM: 309.5
Min nTPM: 163.2
RHH5235_R3607
169.1
RHH5264_R3636
183.1
RHH5207_R3578
309.5
RHH5299_R3665
163.2
T-reg nTPM: 153.7
Samples: 4
Max nTPM: 191.9
Min nTPM: 125.0
RHH5301_R3667
129.2
RHH5237_R3609
191.9
RHH5266_R3638
125.0
RHH5209_R3580
168.7
Terminal effector memory CD4 T-cell nTPM: 138.4
Samples: 2
Max nTPM: 144.8
Min nTPM: 132.0
RHH5243_R3615
132.0
RHH5272_R3644
144.8
Terminal effector memory CD8 T-cell nTPM: 208.9
Samples: 4
Max nTPM: 227.7
Min nTPM: 190.0
RHH5232_R3604
193.9
RHH5204_R3575
223.9
RHH5261_R3633
190.0
RHH5296_R3662
227.7
Vd2 gdTCR nTPM: 224.7
Samples: 4
Max nTPM: 322.2
Min nTPM: 153.4
RHH5234_R3606
225.5
RHH5206_R3577
322.2
RHH5263_R3635
197.5
RHH5298_R3664
153.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.