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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
377.1
nTPM
Monaco:
1015.0
nTPM
Schmiedel:
462.7
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
377.1
HPA sample
nTPM
Classical monocyte nTPM: 244.3
Samples: 6
Max nTPM: 350.6
Min nTPM: 173.2
P10809_1003
350.6
P10809_1020
259.7
P10809_1039
269.9
P10809_1058
173.2
P10809_1080
213.6
P10809_1107
198.8
Intermediate monocyte nTPM: 355.1
Samples: 6
Max nTPM: 451.3
Min nTPM: 259.2
P10809_1004
451.3
P10809_1023
349.1
P10809_1042
414.4
P10809_1061
345.9
P10809_1081
259.2
P10809_1108
310.6
Non-classical monocyte nTPM: 377.1
Samples: 5
Max nTPM: 441.1
Min nTPM: 261.4
P10809_1005
422.4
P10809_1053
441.1
P10809_1072
412.0
P10809_1082
261.4
P10809_1109
348.8
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1015.0
Monaco sample
nTPM
Classical monocyte nTPM: 864.1
Samples: 4
Max nTPM: 994.6
Min nTPM: 687.1
RHH5313_R3680
879.8
RHH5221_R3593
994.6
RHH5250_R3622
894.7
RHH5279_R3651
687.1
Intermediate monocyte nTPM: 969.0
Samples: 4
Max nTPM: 1053.7
Min nTPM: 905.8
RHH5314_R3681
1053.7
RHH5222_R3594
949.5
RHH5251_R3623
905.8
RHH5280_R3652
966.8
Non-classical monocyte nTPM: 1015.0
Samples: 4
Max nTPM: 1112.3
Min nTPM: 964.6
RHH5315_R3682
1112.3
RHH5223_R3595
1007.2
RHH5252_R3624
964.6
RHH5281_R3653
976.0
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
