HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:6.1 nTPM
HPA Brain:26.8 nTPM
GTEx:6.1 nTPM
FANTOM5:19.0 Scaled Tags Per Million
Pig:11.3 nTPM
Mouse:9.7 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043719
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.8
Sample id Sample description nTPM
Hippocampus
nTPM: 20.9
2148 Female, age 91, left hemisphere 21.9
1898 Male, age 80, left hemisphere 21.6
1911 Female, age 85, right hemisphere 21.6
2621 Female, age 67, right hemisphere 21.4
2529 Female, age 94, left hemisphere 20.9
1855 Male, age 76, left hemisphere 18.2
Dentate gyrus
nTPM: 24.1
1927 Female, age 91, both hemispheres 28.2
2531 Female, age 67, both hemispheres 26.3
2530 Female, age 94, left hemisphere 24.8
2010 Male, age 76, both hemispheres 22.3
2246 Female, age 85, both hemispheres 21.5
2528 Male, age 74, both hemispheres 21.3
Entorhinal gyrus
nTPM: 23.1
2613 Female, age 94, left hemisphere 24.3
2686 Male, age 75, right hemisphere 23.9
1938 Female, age 85, left hemisphere 23.5
1787 Male, age 76, left hemisphere 22.7
2117 Female, age 91, right hemisphere 22.5
2764 Male, age 80, right hemisphere 21.7
Hippocampus, CA1
nTPM: 23.2
2045 Male, age 76, both hemispheres 26.0
2749 Male, age 80, left hemisphere 24.4
1873 Female, age 85, both hemispheres 22.5
2527 Male, age 74, both hemispheres 21.8
2082 Female, age 91, right hemisphere 21.4
Hippocampus, CA2
nTPM: 23.6
1892 Male, age 76, both hemispheres 29.0
2249 Male, age 74, both hemispheres 24.6
2437 Female, age 94, left hemisphere 23.9
1963 Male, age 80, left hemisphere 21.6
2113 Female, age 91, right hemisphere 21.6
1940 Female, age 85, left hemisphere 21.0
Hippocampus, CA3
nTPM: 26.8
2436 Male, age 74, both hemispheres 33.5
2620 Female, age 94, left hemisphere 28.8
1867 Male, age 76, both hemispheres 25.9
2137 Male, age 80, left hemisphere 25.8
2861 Female, age 67, both hemispheres 23.6
1891 Female, age 85, both hemispheres 22.9
Parahippocampal cortex
nTPM: 23.8
2693 Female, age 94, both hemispheres 27.4
2250 Female, age 67, right hemisphere 26.8
1990 Female, age 91, right hemisphere 24.2
1850 Male, age 80, both hemispheres 23.8
2622 Female, age 67, right hemisphere 23.7
1933 Female, age 85, both hemispheres 23.2
2018 Male, age 76, both hemispheres 22.8
2245 Female, age 91, both hemispheres 22.5
2692 Male, age 74, both hemispheres 21.9
2532 Female, age 72, left hemisphere 21.6
Perirhinal gyrus
nTPM: 24.2
1841 Female, age 85, right hemisphere 25.8
1794 Male, age 80, right hemisphere 24.5
2521 Female, age 94, right hemisphere 24.5
2848 Male, age 76, right hemisphere 23.8
1847 Female, age 91, left hemisphere 22.5
Subiculum
nTPM: 22.2
1977 Female, age 85, both hemispheres 25.2
2729 Female, age 91, right hemisphere 23.9
1901 Male, age 80, both hemispheres 23.8
2438 Female, age 94, left hemisphere 20.5
2619 Male, age 74, both hemispheres 20.3
2042 Male, age 76, both hemispheres 19.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.1
Samples: 197

Max nTPM: 11.0
Min nTPM: 3.0
Std nTPM: 1.3
Median nTPM: 6.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 11.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 10.8
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 9.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 9.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 8.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 8.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 8.8
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 8.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 8.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 8.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 8.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.0
FF:10153-102I9 76 years, female 21.3
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.3
Pig sample Sample description nTPM
Subiculum
nTPM: 11.0
Samples: 4

Max nTPM: 11.3
Min nTPM: 10.5
Sample A Female 10.5
Sample B Female 11.3
Sample C Male 10.9
Sample D Male 11.3
Dorsal hippocampus
nTPM: 10.6
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.7
Sample A Female 9.7
Sample B Female 10.2
Sample C Male 10.5
Sample D Male 11.9
Entorhinal cortex
nTPM: 11.3
Samples: 4

Max nTPM: 12.5
Min nTPM: 10.6
Sample A Female 10.6
Sample B Female 10.9
Sample C Male 11.1
Sample D Male 12.5
Ventral hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.2
Sample A Female 10.3
Sample B Female 11.9
Sample C Male 9.2
Sample D Male 10.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 9.3
Min nTPM: 7.2
Sample A Male 8.1
Sample B Male 8.5
Sample C Female 9.3
Sample D Female 7.2
Hippocampal formation
nTPM: 9.7
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.6
Sample A Male 10.6
Sample B Male 10.2
Sample C Female 9.5
Sample D Female 8.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
71281331 Antisense, RP_050818_02_D11, Mouse strain C57BL/6J (56 days, male) 1.1

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