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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
27.8
nTPM
Monaco:
33.5
nTPM
Schmiedel:
45.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.8
HPA sample
nTPM
gdT-cell nTPM: 6.2
Samples: 6
Max nTPM: 9.8
Min nTPM: 2.7
P10809_1007
2.7
P10809_1022
4.8
P10809_1041
4.9
P10809_1060
9.6
P10809_1077
5.3
P10809_1098
9.8
MAIT T-cell nTPM: 6.9
Samples: 6
Max nTPM: 13.8
Min nTPM: 2.8
P10809_1006
3.3
P10809_1024
5.8
P10809_1043
5.6
P10809_1062
9.8
P10809_1083
2.8
P10809_1097
13.8
Memory CD4 T-cell nTPM: 23.4
Samples: 6
Max nTPM: 32.0
Min nTPM: 18.3
P10809_1014
18.7
P10809_1026
27.6
P10809_1045
18.3
P10809_1064
22.6
P10809_1086
21.4
P10809_1113
32.0
Memory CD8 T-cell nTPM: 12.3
Samples: 5
Max nTPM: 16.4
Min nTPM: 9.3
P10809_1012
10.1
P10809_1027
14.3
P10809_1046
11.3
P10809_1065
9.3
P10809_1111
16.4
Naive CD4 T-cell nTPM: 27.8
Samples: 6
Max nTPM: 36.0
Min nTPM: 20.9
P10809_1015
20.9
P10809_1030
27.1
P10809_1049
36.0
P10809_1068
23.4
P10809_1085
34.3
P10809_1112
25.1
Naive CD8 T-cell nTPM: 15.9
Samples: 6
Max nTPM: 26.1
Min nTPM: 8.6
P10809_1016
14.5
P10809_1031
26.1
P10809_1050
13.1
P10809_1069
14.5
P10809_1087
8.6
P10809_1110
18.7
T-reg nTPM: 24.8
Samples: 6
Max nTPM: 30.5
Min nTPM: 16.1
P10809_1018
20.2
P10809_1037
16.1
P10809_1056
27.9
P10809_1075
30.5
P10809_1094
24.8
P10809_1106
29.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
33.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 23.9
Samples: 4
Max nTPM: 33.2
Min nTPM: 13.9
RHH5202_R3573
13.9
RHH5230_R3602
25.9
RHH5259_R3631
22.7
RHH5288_R3660
33.2
Effector memory CD8 T-cell nTPM: 14.3
Samples: 4
Max nTPM: 16.0
Min nTPM: 12.1
RHH5203_R3574
12.1
RHH5231_R3603
15.9
RHH5260_R3632
16.0
RHH5289_R3661
13.1
MAIT T-cell nTPM: 9.6
Samples: 4
Max nTPM: 16.3
Min nTPM: 6.0
RHH5233_R3605
6.4
RHH5205_R3576
6.0
RHH5262_R3634
16.3
RHH5297_R3663
9.8
Memory CD4 T-cell TFH nTPM: 31.8
Samples: 4
Max nTPM: 43.7
Min nTPM: 17.9
RHH5300_R3666
17.9
RHH5236_R3608
43.7
RHH5265_R3637
34.9
RHH5208_R3579
30.6
Memory CD4 T-cell Th1 nTPM: 27.6
Samples: 4
Max nTPM: 36.8
Min nTPM: 24.1
RHH5210_R3581
24.1
RHH5302_R3668
36.8
RHH5238_R3610
25.1
RHH5267_R3639
24.2
Memory CD4 T-cell Th1/Th17 nTPM: 24.7
Samples: 4
Max nTPM: 34.2
Min nTPM: 18.0
RHH5303_R3669
34.2
RHH5211_R3582
24.1
RHH5239_R3611
18.0
RHH5268_R3640
22.4
Memory CD4 T-cell Th17 nTPM: 25.0
Samples: 4
Max nTPM: 32.0
Min nTPM: 18.4
RHH5304_R3670
18.4
RHH5212_R3583
25.8
RHH5240_R3612
32.0
RHH5269_R3641
23.6
Memory CD4 T-cell Th2 nTPM: 33.5
Samples: 4
Max nTPM: 49.4
Min nTPM: 20.8
RHH5305_R3671
49.4
RHH5213_R3584
20.8
RHH5241_R3613
39.6
RHH5270_R3642
24.3
Naive CD4 T-cell nTPM: 27.1
Samples: 4
Max nTPM: 31.0
Min nTPM: 22.8
RHH5306_R3672
27.0
RHH5214_R3585
27.7
RHH5242_R3614
31.0
RHH5271_R3643
22.8
Naive CD8 T-cell nTPM: 26.2
Samples: 4
Max nTPM: 36.7
Min nTPM: 8.8
RHH5201_R3572
28.9
RHH5229_R3601
8.8
RHH5258_R3630
30.2
RHH5287_R3659
36.7
Non-Vd2 gdTCR nTPM: 14.8
Samples: 4
Max nTPM: 25.6
Min nTPM: 8.0
RHH5235_R3607
14.7
RHH5264_R3636
25.6
RHH5207_R3578
11.0
RHH5299_R3665
8.0
T-reg nTPM: 31.4
Samples: 4
Max nTPM: 40.8
Min nTPM: 26.1
RHH5301_R3667
26.1
RHH5237_R3609
40.8
RHH5266_R3638
27.4
RHH5209_R3580
31.4
Terminal effector memory CD4 T-cell nTPM: 12.3
Samples: 2
Max nTPM: 19.3
Min nTPM: 5.2
RHH5243_R3615
5.2
RHH5272_R3644
19.3
Terminal effector memory CD8 T-cell nTPM: 9.5
Samples: 4
Max nTPM: 12.8
Min nTPM: 3.9
RHH5232_R3604
10.7
RHH5204_R3575
3.9
RHH5261_R3633
12.8
RHH5296_R3662
10.4
Vd2 gdTCR nTPM: 15.8
Samples: 4
Max nTPM: 21.4
Min nTPM: 5.3
RHH5234_R3606
21.4
RHH5206_R3577
5.3
RHH5263_R3635
17.7
RHH5298_R3664
18.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
