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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
180.1
nTPM
FANTOM5:
205.9
Scaled Tags Per Million
Pig:
72.2
nTPM
Allen mouse:
7.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
180.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 127.0
2301
Female, age 85, both hemispheres
136.2
1984
Male, age 76, both hemispheres
129.7
2188
Female, age 91, both hemispheres
124.0
2090
Male, age 80, both hemispheres
118.1
Dorsal cochlear nucleus nTPM: 119.8
2058
Male, age 76, both hemispheres
131.2
2187
Female, age 91, both hemispheres
122.1
2370
Male, age 61, both hemispheres
121.8
2802
Male, age 74, right hemisphere
120.7
2378
Male, age 80, both hemispheres
103.1
Dorsal tegmental nucleus nTPM: 124.8
2083
Male, age 80, both hemispheres
147.0
2358
Male, age 61, both hemispheres
121.9
1936
Male, age 76, left hemisphere
117.2
2326
Male, age 74, both hemispheres
113.2
Dorsolateral tegmental area nTPM: 113.4
2654
Male, age 80, both hemispheres
137.6
2751
Female, age 85, both hemispheres
122.4
2141
Male, age 76, both hemispheres
114.3
2337
Male, age 61, both hemispheres
100.6
2360
Male, age 74, both hemispheres
91.8
Kolliker-Fuse nucleus nTPM: 130.1
2163
Male, age 80, both hemispheres
162.6
2793
Female, age 91, left hemisphere
152.2
2315
Male, age 76, right hemisphere
75.5
Lateral lemniscal nuclei nTPM: 161.3
2453
Male, age 74, right hemisphere
191.0
2169
Male, age 76, both hemispheres
163.7
2320
Female, age 91, left hemisphere
160.8
2746
Female, age 85, left hemisphere
157.0
2036
Male, age 80, both hemispheres
133.9
Lateral parabrachial nucleus nTPM: 129.1
2139
Female, age 85, right hemisphere
154.5
2790
Male, age 61, both hemispheres
152.6
2013
Male, age 80, both hemispheres
123.3
2792
Male, age 76, both hemispheres
86.1
Lateral vestibular nucleus nTPM: 147.8
2184
Male, age 76, both hemispheres
167.2
2311
Male, age 80, both hemispheres
128.5
Locus coeruleus nTPM: 164.2
2720
Male, age 74, both hemispheres
181.2
2014
Male, age 55, unknown
179.1
2123
Female, age 91, both hemispheres
177.9
2317
Female, age 72, unknown
167.9
1980
Male, age 76, both hemispheres
165.8
2162
Male, age 80, both hemispheres
163.4
2788
Male, age 74, unknown
114.0
Medial parabrachial nucleus nTPM: 142.1
2156
Male, age 61, both hemispheres
171.3
2170
Female, age 91, both hemispheres
138.7
2463
Female, age 85, right hemisphere
136.4
2786
Male, age 76, both hemispheres
135.7
2854
Male, age 80, both hemispheres
128.5
Medial periolivary nuclei nTPM: 154.6
2171
Female, age 85, both hemispheres
205.1
2063
Male, age 76, both hemispheres
162.2
2791
Male, age 74, right hemisphere
139.8
2458
Female, age 91, both hemispheres
137.0
2081
Male, age 80, both hemispheres
128.9
Motor facial nucleus nTPM: 160.0
2062
Male, age 76, both hemispheres
177.0
2327
Male, age 80, both hemispheres
165.8
2365
Male, age 74, right hemisphere
164.1
2795
Female, age 91, both hemispheres
153.5
2126
Male, age 61, both hemispheres
151.5
2697
Female, age 85, both hemispheres
148.1
Motor trigeminal nucleus nTPM: 153.5
2560
Male, age 74, both hemispheres
183.7
2335
Male, age 61, both hemispheres
160.0
2079
Male, age 80, both hemispheres
150.3
2321
Female, age 91, both hemispheres
137.9
2309
Male, age 76, both hemispheres
135.7
Nuclei of the trapezoid body nTPM: 171.3
2159
Male, age 61, both hemispheres
199.6
2735
Female, age 85, both hemispheres
196.4
1983
Male, age 76, both hemispheres
157.1
2368
Female, age 91, both hemispheres
154.9
2166
Male, age 80, both hemispheres
148.7
Nucleus raphe magnus nTPM: 180.1
2160
Male, age 61, both hemispheres
225.2
2172
Female, age 85, both hemispheres
216.6
2455
Male, age 74, both hemispheres
182.7
2328
Male, age 80, both hemispheres
161.1
2459
Female, age 91, both hemispheres
149.1
2051
Male, age 76, both hemispheres
145.7
Paramedian reticular nucleus nTPM: 144.9
2313
Male, age 61, both hemispheres
174.5
2057
Male, age 80, both hemispheres
162.4
2050
Female, age 85, both hemispheres
155.3
2052
Male, age 76, both hemispheres
87.3
Pedunculopontine tegmental nucleus nTPM: 128.3
2334
Male, age 80, both hemispheres
138.1
1921
Female, age 85, both hemispheres
134.1
2338
Male, age 61, both hemispheres
112.6
Pontine nuclei nTPM: 174.5
2787
Female, age 85, both hemispheres
241.3
2727
Male, age 61, right hemisphere
198.1
1863
Male, age 55, unknown
186.4
1968
Male, age 76, left hemisphere
176.4
2109
Female, age 72, unknown
163.8
2454
Male, age 74, left hemisphere
157.1
2115
Male, age 80, left hemisphere
142.3
2319
Female, age 91, both hemispheres
130.4
Pontine raphe nucleus nTPM: 145.7
2122
Female, age 85, midline
165.6
2853
Male, age 76, midline
125.8
Posteroventral cochlear nucleus nTPM: 120.0
2752
Female, age 85, both hemispheres
153.2
2070
Male, age 76, both hemispheres
136.7
2371
Male, age 61, both hemispheres
116.3
2135
Female, age 91, both hemispheres
97.6
2341
Male, age 80, both hemispheres
96.2
Principal sensory trigeminal nucleus nTPM: 161.3
2158
Male, age 61, both hemispheres
209.4
2008
Male, age 80, left hemisphere
152.4
2324
Male, age 76, both hemispheres
146.6
2367
Female, age 91, left hemisphere
136.8
Reticular pontine nucleus, caudal nTPM: 153.7
2332
Male, age 80, right hemisphere
179.8
2559
Male, age 74, both hemispheres
150.7
2457
Female, age 91, both hemispheres
149.6
2092
Male, age 76, both hemispheres
134.6
Reticular pontine nucleus, oral nTPM: 138.2
2361
Male, age 74, both hemispheres
158.9
2012
Female, age 85, both hemispheres
143.7
2366
Female, age 91, both hemispheres
140.9
1939
Male, age 80, both hemispheres
124.7
2167
Male, age 76, both hemispheres
122.6
Reticulotegmental nucleus nTPM: 146.3
2452
Male, age 74, both hemispheres
164.1
2333
Male, age 80, both hemispheres
146.2
2322
Female, age 91, both hemispheres
138.7
2325
Male, age 76, both hemispheres
136.3
Spinal trigeminal nucleus, oral nTPM: 151.7
2164
Male, age 80, both hemispheres
167.3
2737
Female, age 85, both hemispheres
150.3
1978
Male, age 76, both hemispheres
137.5
Subcoeruleus area nTPM: 139.2
2323
Female, age 91, left hemisphere
156.5
2089
Male, age 76, left hemisphere
152.9
2451
Male, age 74, both hemispheres
139.2
1958
Male, age 80, both hemispheres
134.3
2369
Female, age 85, left hemisphere
113.3
Superior olive nTPM: 151.4
1875
Female, age 85, both hemispheres
162.0
2561
Female, age 91, both hemispheres
157.6
2329
Male, age 80, right hemisphere
155.9
2364
Male, age 74, right hemisphere
145.8
2020
Male, age 76, both hemispheres
135.9
Ventral periolivary nuclei nTPM: 158.0
2130
Female, age 85, both hemispheres
195.2
2165
Male, age 80, both hemispheres
170.0
2794
Female, age 91, left hemisphere
146.8
2023
Male, age 76, both hemispheres
120.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 148.6
2449
Male, age 74, both hemispheres
183.4
2456
Female, age 91, both hemispheres
147.3
2161
Male, age 80, both hemispheres
141.9
2840
Female, age 85, both hemispheres
141.7
1959
Male, age 76, both hemispheres
140.5
2359
Male, age 61, both hemispheres
136.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
72.2
Pig sample
Sample description
nTPM
Pons nTPM: 72.2
Samples: 4
Max nTPM: 86.2
Min nTPM: 64.9
Sample A
Female
86.2
Sample B
Female
64.9
Sample C
Male
67.9
Sample D
Male
69.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
