HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:12.4 nTPM
HPA Brain:22.9 nTPM
GTEx:12.4 nTPM
FANTOM5:12.5 Scaled Tags Per Million
Pig:16.7 nTPM
Mouse:10.0 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.9
Sample id Sample description nTPM
Hippocampus
nTPM: 22.4
2529 Female, age 94, left hemisphere 24.5
2148 Female, age 91, left hemisphere 23.4
2621 Female, age 67, right hemisphere 22.9
1911 Female, age 85, right hemisphere 22.0
1898 Male, age 80, left hemisphere 21.1
1855 Male, age 76, left hemisphere 20.8
Dentate gyrus
nTPM: 21.7
2530 Female, age 94, left hemisphere 28.0
2010 Male, age 76, both hemispheres 22.7
2531 Female, age 67, both hemispheres 21.5
2528 Male, age 74, both hemispheres 21.2
2246 Female, age 85, both hemispheres 19.5
1927 Female, age 91, both hemispheres 17.4
Entorhinal gyrus
nTPM: 22.1
2117 Female, age 91, right hemisphere 25.4
2613 Female, age 94, left hemisphere 23.5
2686 Male, age 75, right hemisphere 22.8
1787 Male, age 76, left hemisphere 21.2
2764 Male, age 80, right hemisphere 20.7
1938 Female, age 85, left hemisphere 19.3
Hippocampus, CA1
nTPM: 19.6
2527 Male, age 74, both hemispheres 21.5
2082 Female, age 91, right hemisphere 21.0
2045 Male, age 76, both hemispheres 18.7
2749 Male, age 80, left hemisphere 18.5
1873 Female, age 85, both hemispheres 18.0
Hippocampus, CA2
nTPM: 22.1
1963 Male, age 80, left hemisphere 27.0
2437 Female, age 94, left hemisphere 23.5
2113 Female, age 91, right hemisphere 21.7
1940 Female, age 85, left hemisphere 21.1
1892 Male, age 76, both hemispheres 19.9
2249 Male, age 74, both hemispheres 19.2
Hippocampus, CA3
nTPM: 20.7
2861 Female, age 67, both hemispheres 26.1
1867 Male, age 76, both hemispheres 21.2
2436 Male, age 74, both hemispheres 20.3
2620 Female, age 94, left hemisphere 19.4
1891 Female, age 85, both hemispheres 19.2
2137 Male, age 80, left hemisphere 18.3
Parahippocampal cortex
nTPM: 20.7
2692 Male, age 74, both hemispheres 25.7
2018 Male, age 76, both hemispheres 22.6
2622 Female, age 67, right hemisphere 22.3
2245 Female, age 91, both hemispheres 21.9
2532 Female, age 72, left hemisphere 21.4
1933 Female, age 85, both hemispheres 19.5
1990 Female, age 91, right hemisphere 19.5
2693 Female, age 94, both hemispheres 18.6
2250 Female, age 67, right hemisphere 18.5
1850 Male, age 80, both hemispheres 17.3
Perirhinal gyrus
nTPM: 18.0
2521 Female, age 94, right hemisphere 20.4
1794 Male, age 80, right hemisphere 18.9
1847 Female, age 91, left hemisphere 18.2
2848 Male, age 76, right hemisphere 16.7
1841 Female, age 85, right hemisphere 16.1
Subiculum
nTPM: 22.9
2438 Female, age 94, left hemisphere 25.8
2619 Male, age 74, both hemispheres 24.1
2042 Male, age 76, both hemispheres 23.9
2729 Female, age 91, right hemisphere 22.8
1977 Female, age 85, both hemispheres 20.4
1901 Male, age 80, both hemispheres 20.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.4
Samples: 197

Max nTPM: 20.0
Min nTPM: 7.2
Std nTPM: 2.3
Median nTPM: 12.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 20.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 19.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 18.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 17.5
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 17.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 17.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 17.0
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 17.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 16.8
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 16.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 16.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.5
FF:10153-102I9 76 years, female 17.8
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.7
Pig sample Sample description nTPM
Subiculum
nTPM: 16.0
Samples: 4

Max nTPM: 17.4
Min nTPM: 15.0
Sample A Female 17.4
Sample B Female 16.2
Sample C Male 15.2
Sample D Male 15.0
Dorsal hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 18.2
Min nTPM: 12.4
Sample A Female 18.2
Sample B Female 16.7
Sample C Male 17.2
Sample D Male 12.4
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 16.5
Min nTPM: 13.8
Sample A Female 15.8
Sample B Female 16.5
Sample C Male 16.1
Sample D Male 13.8
Ventral hippocampus
nTPM: 16.7
Samples: 4

Max nTPM: 20.0
Min nTPM: 14.9
Sample A Female 15.5
Sample B Female 16.5
Sample C Male 20.0
Sample D Male 14.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 10.3
Min nTPM: 7.0
Sample A Male 10.3
Sample B Male 9.9
Sample C Female 8.4
Sample D Female 7.0
Hippocampal formation
nTPM: 10.0
Samples: 4

Max nTPM: 11.3
Min nTPM: 9.2
Sample A Male 9.6
Sample B Male 9.9
Sample C Female 9.2
Sample D Female 11.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70303737 Antisense, RP_050609_02_C06, Mouse strain C57BL/6J (56 days, male) 0.3

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