HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:87.0 nTPM
HPA Brain:45.7 nTPM
GTEx:87.0 nTPM
FANTOM5:81.9 Scaled Tags Per Million
Pig:16.2 nTPM
Mouse:58.4 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.7
Sample id Sample description nTPM
Hippocampus
nTPM: 45.7
1898 Male, age 80, left hemisphere 54.9
2529 Female, age 94, left hemisphere 53.5
1855 Male, age 76, left hemisphere 49.8
1911 Female, age 85, right hemisphere 43.7
2621 Female, age 67, right hemisphere 39.2
2148 Female, age 91, left hemisphere 33.3
Dentate gyrus
nTPM: 41.1
2530 Female, age 94, left hemisphere 60.4
2010 Male, age 76, both hemispheres 58.7
2246 Female, age 85, both hemispheres 41.9
1927 Female, age 91, both hemispheres 29.8
2531 Female, age 67, both hemispheres 28.2
2528 Male, age 74, both hemispheres 27.9
Entorhinal gyrus
nTPM: 37.5
1938 Female, age 85, left hemisphere 47.1
2117 Female, age 91, right hemisphere 41.1
2686 Male, age 75, right hemisphere 37.8
1787 Male, age 76, left hemisphere 36.4
2764 Male, age 80, right hemisphere 35.0
2613 Female, age 94, left hemisphere 27.4
Hippocampus, CA1
nTPM: 42.1
2749 Male, age 80, left hemisphere 55.6
1873 Female, age 85, both hemispheres 43.4
2527 Male, age 74, both hemispheres 40.5
2045 Male, age 76, both hemispheres 39.2
2082 Female, age 91, right hemisphere 31.9
Hippocampus, CA2
nTPM: 43.1
1963 Male, age 80, left hemisphere 54.2
1892 Male, age 76, both hemispheres 45.4
2249 Male, age 74, both hemispheres 44.4
1940 Female, age 85, left hemisphere 42.4
2437 Female, age 94, left hemisphere 40.8
2113 Female, age 91, right hemisphere 31.4
Hippocampus, CA3
nTPM: 32.3
1867 Male, age 76, both hemispheres 41.3
2137 Male, age 80, left hemisphere 40.1
1891 Female, age 85, both hemispheres 37.9
2436 Male, age 74, both hemispheres 30.0
2861 Female, age 67, both hemispheres 22.2
2620 Female, age 94, left hemisphere 22.1
Parahippocampal cortex
nTPM: 36.4
2018 Male, age 76, both hemispheres 50.8
1850 Male, age 80, both hemispheres 41.0
2245 Female, age 91, both hemispheres 40.8
2532 Female, age 72, left hemisphere 40.0
1933 Female, age 85, both hemispheres 39.7
2250 Female, age 67, right hemisphere 35.5
1990 Female, age 91, right hemisphere 33.9
2692 Male, age 74, both hemispheres 32.6
2622 Female, age 67, right hemisphere 26.0
2693 Female, age 94, both hemispheres 23.7
Perirhinal gyrus
nTPM: 37.2
1841 Female, age 85, right hemisphere 41.0
2848 Male, age 76, right hemisphere 39.2
1794 Male, age 80, right hemisphere 37.0
1847 Female, age 91, left hemisphere 36.1
2521 Female, age 94, right hemisphere 32.5
Subiculum
nTPM: 44.9
2042 Male, age 76, both hemispheres 61.3
2438 Female, age 94, left hemisphere 57.8
1977 Female, age 85, both hemispheres 44.3
1901 Male, age 80, both hemispheres 44.0
2619 Male, age 74, both hemispheres 31.1
2729 Female, age 91, right hemisphere 30.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 87.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 87.0
Samples: 197

Max nTPM: 200.6
Min nTPM: 34.7
Std nTPM: 26.2
Median nTPM: 83.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 200.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 180.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 178.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 178.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 165.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 165.1
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 148.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 147.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 146.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 136.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 135.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 81.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.9
FF:10153-102I9 76 years, female 90.1
FF:10169-103B7 60 years, female 73.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.2
Pig sample Sample description nTPM
Subiculum
nTPM: 15.4
Samples: 4

Max nTPM: 17.9
Min nTPM: 13.7
Sample A Female 17.9
Sample B Female 14.7
Sample C Male 13.7
Sample D Male 15.1
Dorsal hippocampus
nTPM: 16.2
Samples: 4

Max nTPM: 17.7
Min nTPM: 14.2
Sample A Female 17.7
Sample B Female 14.2
Sample C Male 17.6
Sample D Male 15.3
Entorhinal cortex
nTPM: 15.4
Samples: 4

Max nTPM: 16.8
Min nTPM: 13.4
Sample A Female 15.1
Sample B Female 16.8
Sample C Male 13.4
Sample D Male 16.1
Ventral hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 16.3
Min nTPM: 10.6
Sample A Female 16.2
Sample B Female 13.2
Sample C Male 10.6
Sample D Male 16.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.4
Samples: 4

Max nTPM: 70.8
Min nTPM: 49.5
Sample A Male 55.7
Sample B Male 70.8
Sample C Female 57.4
Sample D Female 49.5
Hippocampal formation
nTPM: 55.6
Samples: 4

Max nTPM: 61.8
Min nTPM: 50.7
Sample A Male 61.8
Sample B Male 52.0
Sample C Female 50.7
Sample D Female 57.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68862150 Antisense, RP_050301_01_F05, Mouse strain C57BL/6J (56 days, male) 0.0

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