HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Neuronal cells: Low
RNA expressioni
Consensus:15.0 nTPM
HPA Brain:64.1 nTPM
GTEx:15.0 nTPM
FANTOM5:40.2 Scaled Tags Per Million
Pig:23.5 nTPM
Mouse:18.8 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038862
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.1
Sample id Sample description nTPM
Hippocampus
nTPM: 61.2
1911 Female, age 85, right hemisphere 68.0
2529 Female, age 94, left hemisphere 61.6
1855 Male, age 76, left hemisphere 61.3
2148 Female, age 91, left hemisphere 61.0
1898 Male, age 80, left hemisphere 58.4
2621 Female, age 67, right hemisphere 57.2
Dentate gyrus
nTPM: 60.2
2010 Male, age 76, both hemispheres 64.7
2530 Female, age 94, left hemisphere 60.5
2246 Female, age 85, both hemispheres 59.9
1927 Female, age 91, both hemispheres 59.2
2528 Male, age 74, both hemispheres 58.6
2531 Female, age 67, both hemispheres 58.3
Entorhinal gyrus
nTPM: 58.8
2117 Female, age 91, right hemisphere 67.6
2686 Male, age 75, right hemisphere 62.4
1938 Female, age 85, left hemisphere 58.5
1787 Male, age 76, left hemisphere 57.8
2613 Female, age 94, left hemisphere 56.1
2764 Male, age 80, right hemisphere 50.5
Hippocampus, CA1
nTPM: 58.6
2082 Female, age 91, right hemisphere 66.7
2527 Male, age 74, both hemispheres 62.1
1873 Female, age 85, both hemispheres 61.6
2045 Male, age 76, both hemispheres 54.9
2749 Male, age 80, left hemisphere 47.8
Hippocampus, CA2
nTPM: 61.5
2113 Female, age 91, right hemisphere 70.4
1940 Female, age 85, left hemisphere 64.4
2437 Female, age 94, left hemisphere 63.1
2249 Male, age 74, both hemispheres 61.3
1963 Male, age 80, left hemisphere 58.7
1892 Male, age 76, both hemispheres 51.5
Hippocampus, CA3
nTPM: 57.3
1891 Female, age 85, both hemispheres 66.7
2436 Male, age 74, both hemispheres 65.7
2861 Female, age 67, both hemispheres 56.4
1867 Male, age 76, both hemispheres 55.6
2137 Male, age 80, left hemisphere 51.8
2620 Female, age 94, left hemisphere 47.6
Parahippocampal cortex
nTPM: 60.8
2693 Female, age 94, both hemispheres 66.2
2692 Male, age 74, both hemispheres 64.8
2250 Female, age 67, right hemisphere 61.8
1990 Female, age 91, right hemisphere 61.3
2532 Female, age 72, left hemisphere 59.6
1850 Male, age 80, both hemispheres 59.5
1933 Female, age 85, both hemispheres 59.2
2018 Male, age 76, both hemispheres 59.1
2245 Female, age 91, both hemispheres 58.2
2622 Female, age 67, right hemisphere 58.2
Perirhinal gyrus
nTPM: 55.3
1841 Female, age 85, right hemisphere 59.7
2848 Male, age 76, right hemisphere 58.3
2521 Female, age 94, right hemisphere 55.5
1794 Male, age 80, right hemisphere 53.3
1847 Female, age 91, left hemisphere 49.8
Subiculum
nTPM: 64.1
2042 Male, age 76, both hemispheres 75.9
2729 Female, age 91, right hemisphere 65.1
2619 Male, age 74, both hemispheres 63.1
1901 Male, age 80, both hemispheres 61.8
2438 Female, age 94, left hemisphere 59.6
1977 Female, age 85, both hemispheres 59.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.0
Samples: 197

Max nTPM: 29.8
Min nTPM: 8.1
Std nTPM: 2.8
Median nTPM: 14.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 29.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 23.8
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 23.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 22.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 20.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 20.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 20.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 19.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 19.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 19.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 19.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.2
FF:10153-102I9 76 years, female 43.1
FF:10169-103B7 60 years, female 37.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.5
Pig sample Sample description nTPM
Subiculum
nTPM: 20.8
Samples: 4

Max nTPM: 22.9
Min nTPM: 19.2
Sample A Female 22.0
Sample B Female 19.2
Sample C Male 19.2
Sample D Male 22.9
Dorsal hippocampus
nTPM: 23.6
Samples: 4

Max nTPM: 28.5
Min nTPM: 19.5
Sample A Female 25.1
Sample B Female 19.5
Sample C Male 28.5
Sample D Male 21.1
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 20.3
Min nTPM: 17.4
Sample A Female 20.1
Sample B Female 20.3
Sample C Male 17.4
Sample D Male 17.9
Ventral hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 23.2
Min nTPM: 16.3
Sample A Female 23.2
Sample B Female 20.8
Sample C Male 16.3
Sample D Male 22.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.3
Samples: 4

Max nTPM: 19.1
Min nTPM: 16.4
Sample A Male 19.1
Sample B Male 16.9
Sample C Female 16.4
Sample D Female 16.7
Hippocampal formation
nTPM: 18.8
Samples: 4

Max nTPM: 21.3
Min nTPM: 14.2
Sample A Male 14.2
Sample B Male 21.3
Sample C Female 20.5
Sample D Female 19.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
77799019 Antisense, RP_070212_03_C05, Mouse strain C57BL/6J (56 days, male) 0.5

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