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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
34.5
nTPM
Monaco:
135.5
nTPM
Schmiedel:
38.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
34.5
HPA sample
nTPM
gdT-cell nTPM: 29.2
Samples: 6
Max nTPM: 38.3
Min nTPM: 20.4
P10809_1007
20.4
P10809_1022
38.3
P10809_1041
36.6
P10809_1060
32.3
P10809_1077
20.8
P10809_1098
26.9
MAIT T-cell nTPM: 34.5
Samples: 6
Max nTPM: 46.2
Min nTPM: 25.0
P10809_1006
25.0
P10809_1024
35.4
P10809_1043
34.0
P10809_1062
46.2
P10809_1083
26.6
P10809_1097
39.8
Memory CD4 T-cell nTPM: 22.9
Samples: 6
Max nTPM: 31.3
Min nTPM: 15.5
P10809_1014
15.5
P10809_1026
24.1
P10809_1045
31.3
P10809_1064
20.8
P10809_1086
25.6
P10809_1113
19.8
Memory CD8 T-cell nTPM: 27.2
Samples: 5
Max nTPM: 36.7
Min nTPM: 17.7
P10809_1012
17.7
P10809_1027
25.3
P10809_1046
30.4
P10809_1065
36.7
P10809_1111
26.0
Naive CD4 T-cell nTPM: 30.9
Samples: 6
Max nTPM: 47.4
Min nTPM: 17.4
P10809_1015
20.1
P10809_1030
34.5
P10809_1049
42.4
P10809_1068
47.4
P10809_1085
17.4
P10809_1112
23.5
Naive CD8 T-cell nTPM: 27.4
Samples: 6
Max nTPM: 32.4
Min nTPM: 21.3
P10809_1016
21.3
P10809_1031
32.4
P10809_1050
29.9
P10809_1069
31.1
P10809_1087
28.2
P10809_1110
21.6
T-reg nTPM: 23.8
Samples: 6
Max nTPM: 28.4
Min nTPM: 14.1
P10809_1018
14.1
P10809_1037
25.5
P10809_1056
21.9
P10809_1075
27.6
P10809_1094
25.1
P10809_1106
28.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
135.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 85.8
Samples: 4
Max nTPM: 100.5
Min nTPM: 66.5
RHH5202_R3573
100.5
RHH5230_R3602
93.4
RHH5259_R3631
66.5
RHH5288_R3660
82.8
Effector memory CD8 T-cell nTPM: 102.7
Samples: 4
Max nTPM: 126.2
Min nTPM: 83.1
RHH5203_R3574
99.2
RHH5231_R3603
102.1
RHH5260_R3632
83.1
RHH5289_R3661
126.2
MAIT T-cell nTPM: 112.2
Samples: 4
Max nTPM: 127.6
Min nTPM: 88.4
RHH5233_R3605
124.1
RHH5205_R3576
127.6
RHH5262_R3634
88.4
RHH5297_R3663
108.5
Memory CD4 T-cell TFH nTPM: 89.1
Samples: 4
Max nTPM: 106.7
Min nTPM: 67.8
RHH5300_R3666
67.8
RHH5236_R3608
81.0
RHH5265_R3637
106.7
RHH5208_R3579
100.9
Memory CD4 T-cell Th1 nTPM: 94.0
Samples: 4
Max nTPM: 103.0
Min nTPM: 76.3
RHH5210_R3581
101.6
RHH5302_R3668
76.3
RHH5238_R3610
95.2
RHH5267_R3639
103.0
Memory CD4 T-cell Th1/Th17 nTPM: 91.5
Samples: 4
Max nTPM: 108.1
Min nTPM: 74.4
RHH5303_R3669
74.4
RHH5211_R3582
91.6
RHH5239_R3611
108.1
RHH5268_R3640
91.7
Memory CD4 T-cell Th17 nTPM: 91.7
Samples: 4
Max nTPM: 108.9
Min nTPM: 81.1
RHH5304_R3670
85.3
RHH5212_R3583
81.1
RHH5240_R3612
108.9
RHH5269_R3641
91.3
Memory CD4 T-cell Th2 nTPM: 78.7
Samples: 4
Max nTPM: 96.8
Min nTPM: 46.8
RHH5305_R3671
81.0
RHH5213_R3584
96.8
RHH5241_R3613
90.0
RHH5270_R3642
46.8
Naive CD4 T-cell nTPM: 119.0
Samples: 4
Max nTPM: 148.1
Min nTPM: 103.7
RHH5306_R3672
114.9
RHH5214_R3585
103.7
RHH5242_R3614
148.1
RHH5271_R3643
109.2
Naive CD8 T-cell nTPM: 135.5
Samples: 4
Max nTPM: 167.8
Min nTPM: 101.5
RHH5201_R3572
137.4
RHH5229_R3601
135.2
RHH5258_R3630
101.5
RHH5287_R3659
167.8
Non-Vd2 gdTCR nTPM: 111.3
Samples: 4
Max nTPM: 145.2
Min nTPM: 87.5
RHH5235_R3607
111.0
RHH5264_R3636
87.5
RHH5207_R3578
145.2
RHH5299_R3665
101.3
T-reg nTPM: 86.4
Samples: 4
Max nTPM: 93.5
Min nTPM: 77.3
RHH5301_R3667
77.3
RHH5237_R3609
90.7
RHH5266_R3638
93.5
RHH5209_R3580
84.1
Terminal effector memory CD4 T-cell nTPM: 110.9
Samples: 2
Max nTPM: 120.9
Min nTPM: 100.8
RHH5243_R3615
120.9
RHH5272_R3644
100.8
Terminal effector memory CD8 T-cell nTPM: 120.8
Samples: 4
Max nTPM: 170.6
Min nTPM: 92.9
RHH5232_R3604
170.6
RHH5204_R3575
105.1
RHH5261_R3633
92.9
RHH5296_R3662
114.4
Vd2 gdTCR nTPM: 108.2
Samples: 4
Max nTPM: 133.2
Min nTPM: 80.8
RHH5234_R3606
133.2
RHH5206_R3577
91.0
RHH5263_R3635
80.8
RHH5298_R3664
127.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
