HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:28.1 nTPM
HPA Brain:64.7 nTPM
GTEx:28.1 nTPM
FANTOM5:106.0 Scaled Tags Per Million
Pig:56.9 nTPM
Mouse:132.8 nTPM
Allen mouse:5.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048226Antibody HPA050136Antibody CAB017022
Glial cells MediumHighHigh
Neuronal cells MediumMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.7
Sample id Sample description nTPM
Hippocampus
nTPM: 59.5
1855 Male, age 76, left hemisphere 64.5
2621 Female, age 67, right hemisphere 63.1
1898 Male, age 80, left hemisphere 61.2
2148 Female, age 91, left hemisphere 60.6
1911 Female, age 85, right hemisphere 55.0
2529 Female, age 94, left hemisphere 52.3
Dentate gyrus
nTPM: 58.7
1927 Female, age 91, both hemispheres 62.7
2246 Female, age 85, both hemispheres 61.2
2531 Female, age 67, both hemispheres 60.8
2010 Male, age 76, both hemispheres 58.9
2530 Female, age 94, left hemisphere 57.6
2528 Male, age 74, both hemispheres 50.9
Entorhinal gyrus
nTPM: 60.2
1938 Female, age 85, left hemisphere 65.1
2613 Female, age 94, left hemisphere 63.8
1787 Male, age 76, left hemisphere 62.2
2764 Male, age 80, right hemisphere 62.1
2117 Female, age 91, right hemisphere 54.1
2686 Male, age 75, right hemisphere 53.9
Hippocampus, CA1
nTPM: 64.5
2749 Male, age 80, left hemisphere 84.6
2045 Male, age 76, both hemispheres 67.4
1873 Female, age 85, both hemispheres 61.4
2527 Male, age 74, both hemispheres 55.6
2082 Female, age 91, right hemisphere 53.6
Hippocampus, CA2
nTPM: 56.2
1892 Male, age 76, both hemispheres 62.4
1963 Male, age 80, left hemisphere 62.2
2113 Female, age 91, right hemisphere 54.6
2249 Male, age 74, both hemispheres 53.8
1940 Female, age 85, left hemisphere 52.7
2437 Female, age 94, left hemisphere 51.2
Hippocampus, CA3
nTPM: 63.5
2137 Male, age 80, left hemisphere 73.4
2620 Female, age 94, left hemisphere 69.0
2861 Female, age 67, both hemispheres 64.6
2436 Male, age 74, both hemispheres 62.9
1867 Male, age 76, both hemispheres 60.4
1891 Female, age 85, both hemispheres 50.6
Parahippocampal cortex
nTPM: 57.2
1933 Female, age 85, both hemispheres 61.5
1850 Male, age 80, both hemispheres 61.2
2245 Female, age 91, both hemispheres 58.7
2622 Female, age 67, right hemisphere 57.8
2250 Female, age 67, right hemisphere 57.2
2532 Female, age 72, left hemisphere 56.9
1990 Female, age 91, right hemisphere 56.2
2693 Female, age 94, both hemispheres 56.0
2692 Male, age 74, both hemispheres 55.5
2018 Male, age 76, both hemispheres 51.5
Perirhinal gyrus
nTPM: 64.7
1847 Female, age 91, left hemisphere 72.0
1841 Female, age 85, right hemisphere 65.3
1794 Male, age 80, right hemisphere 63.7
2521 Female, age 94, right hemisphere 61.7
2848 Male, age 76, right hemisphere 61.0
Subiculum
nTPM: 55.1
1901 Male, age 80, both hemispheres 58.2
1977 Female, age 85, both hemispheres 56.1
2619 Male, age 74, both hemispheres 55.4
2729 Female, age 91, right hemisphere 55.1
2438 Female, age 94, left hemisphere 53.9
2042 Male, age 76, both hemispheres 51.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.1
Samples: 197

Max nTPM: 45.5
Min nTPM: 15.1
Std nTPM: 5.2
Median nTPM: 27.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 45.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 42.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 41.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 38.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 38.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 37.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 37.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 37.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 37.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 37.0
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 36.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 106.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 106.0
FF:10169-103B7 60 years, female 118.3
FF:10153-102I9 76 years, female 93.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.9
Pig sample Sample description nTPM
Subiculum
nTPM: 52.1
Samples: 4

Max nTPM: 63.7
Min nTPM: 46.8
Sample A Female 63.7
Sample B Female 48.5
Sample C Male 49.2
Sample D Male 46.8
Dorsal hippocampus
nTPM: 56.6
Samples: 4

Max nTPM: 65.4
Min nTPM: 44.5
Sample A Female 65.4
Sample B Female 61.6
Sample C Male 54.9
Sample D Male 44.5
Entorhinal cortex
nTPM: 56.9
Samples: 4

Max nTPM: 64.7
Min nTPM: 50.1
Sample A Female 64.7
Sample B Female 57.6
Sample C Male 55.2
Sample D Male 50.1
Ventral hippocampus
nTPM: 52.5
Samples: 4

Max nTPM: 59.2
Min nTPM: 41.6
Sample A Female 52.5
Sample B Female 41.6
Sample C Male 59.2
Sample D Male 56.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 132.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 132.8
Samples: 4

Max nTPM: 135.8
Min nTPM: 130.6
Sample A Male 130.6
Sample B Male 135.8
Sample C Female 132.8
Sample D Female 132.1
Hippocampal formation
nTPM: 131.9
Samples: 4

Max nTPM: 142.6
Min nTPM: 125.5
Sample A Male 142.6
Sample B Male 125.5
Sample C Female 130.8
Sample D Female 128.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.9
100146071 Antisense, RP_110421_02_F09, Mouse strain C57BL/6J (56 days, male) 5.9

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