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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
57.0
nTPM
Monaco:
181.8
nTPM
Schmiedel:
98.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.0
HPA sample
nTPM
gdT-cell nTPM: 44.5
Samples: 6
Max nTPM: 56.9
Min nTPM: 34.5
P10809_1007
39.9
P10809_1022
56.9
P10809_1041
47.8
P10809_1060
43.1
P10809_1077
44.6
P10809_1098
34.5
MAIT T-cell nTPM: 39.0
Samples: 6
Max nTPM: 51.6
Min nTPM: 30.1
P10809_1006
38.1
P10809_1024
51.6
P10809_1043
41.7
P10809_1062
38.0
P10809_1083
34.6
P10809_1097
30.1
Memory CD4 T-cell nTPM: 36.5
Samples: 6
Max nTPM: 43.0
Min nTPM: 32.2
P10809_1014
32.2
P10809_1026
37.6
P10809_1045
43.0
P10809_1064
35.0
P10809_1086
35.9
P10809_1113
35.5
Memory CD8 T-cell nTPM: 42.8
Samples: 5
Max nTPM: 51.3
Min nTPM: 38.5
P10809_1012
45.9
P10809_1027
51.3
P10809_1046
39.8
P10809_1065
38.5
P10809_1111
38.5
Naive CD4 T-cell nTPM: 35.1
Samples: 6
Max nTPM: 44.7
Min nTPM: 24.9
P10809_1015
33.4
P10809_1030
32.0
P10809_1049
24.9
P10809_1068
44.7
P10809_1085
41.5
P10809_1112
33.9
Naive CD8 T-cell nTPM: 40.5
Samples: 6
Max nTPM: 51.2
Min nTPM: 28.7
P10809_1016
39.0
P10809_1031
39.2
P10809_1050
39.3
P10809_1069
51.2
P10809_1087
45.3
P10809_1110
28.7
T-reg nTPM: 57.0
Samples: 6
Max nTPM: 74.2
Min nTPM: 42.7
P10809_1018
50.6
P10809_1037
55.3
P10809_1056
68.0
P10809_1075
42.7
P10809_1094
74.2
P10809_1106
51.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
181.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 145.9
Samples: 4
Max nTPM: 179.6
Min nTPM: 130.9
RHH5202_R3573
137.4
RHH5230_R3602
135.8
RHH5259_R3631
179.6
RHH5288_R3660
130.9
Effector memory CD8 T-cell nTPM: 162.3
Samples: 4
Max nTPM: 189.6
Min nTPM: 142.1
RHH5203_R3574
163.8
RHH5231_R3603
142.1
RHH5260_R3632
153.6
RHH5289_R3661
189.6
MAIT T-cell nTPM: 112.6
Samples: 4
Max nTPM: 119.4
Min nTPM: 103.6
RHH5233_R3605
119.4
RHH5205_R3576
116.4
RHH5262_R3634
111.1
RHH5297_R3663
103.6
Memory CD4 T-cell TFH nTPM: 137.1
Samples: 4
Max nTPM: 157.8
Min nTPM: 125.8
RHH5300_R3666
133.8
RHH5236_R3608
125.8
RHH5265_R3637
130.8
RHH5208_R3579
157.8
Memory CD4 T-cell Th1 nTPM: 138.5
Samples: 4
Max nTPM: 152.9
Min nTPM: 129.6
RHH5210_R3581
138.9
RHH5302_R3668
129.6
RHH5238_R3610
152.9
RHH5267_R3639
132.6
Memory CD4 T-cell Th1/Th17 nTPM: 138.0
Samples: 4
Max nTPM: 184.6
Min nTPM: 103.3
RHH5303_R3669
125.9
RHH5211_R3582
103.3
RHH5239_R3611
184.6
RHH5268_R3640
138.0
Memory CD4 T-cell Th17 nTPM: 128.7
Samples: 4
Max nTPM: 155.1
Min nTPM: 81.1
RHH5304_R3670
141.9
RHH5212_R3583
81.1
RHH5240_R3612
155.1
RHH5269_R3641
136.8
Memory CD4 T-cell Th2 nTPM: 122.2
Samples: 4
Max nTPM: 136.7
Min nTPM: 107.2
RHH5305_R3671
131.2
RHH5213_R3584
113.8
RHH5241_R3613
107.2
RHH5270_R3642
136.7
Naive CD4 T-cell nTPM: 148.2
Samples: 4
Max nTPM: 168.4
Min nTPM: 136.7
RHH5306_R3672
136.7
RHH5214_R3585
145.2
RHH5242_R3614
142.6
RHH5271_R3643
168.4
Naive CD8 T-cell nTPM: 119.1
Samples: 4
Max nTPM: 139.2
Min nTPM: 104.7
RHH5201_R3572
139.2
RHH5229_R3601
126.2
RHH5258_R3630
106.2
RHH5287_R3659
104.7
Non-Vd2 gdTCR nTPM: 173.1
Samples: 4
Max nTPM: 222.3
Min nTPM: 135.8
RHH5235_R3607
135.8
RHH5264_R3636
173.6
RHH5207_R3578
222.3
RHH5299_R3665
160.8
T-reg nTPM: 143.1
Samples: 4
Max nTPM: 164.7
Min nTPM: 130.0
RHH5301_R3667
130.0
RHH5237_R3609
135.6
RHH5266_R3638
164.7
RHH5209_R3580
142.0
Terminal effector memory CD4 T-cell nTPM: 181.8
Samples: 2
Max nTPM: 183.1
Min nTPM: 180.4
RHH5243_R3615
183.1
RHH5272_R3644
180.4
Terminal effector memory CD8 T-cell nTPM: 176.0
Samples: 4
Max nTPM: 205.8
Min nTPM: 160.0
RHH5232_R3604
205.8
RHH5204_R3575
160.0
RHH5261_R3633
177.9
RHH5296_R3662
160.3
Vd2 gdTCR nTPM: 137.4
Samples: 4
Max nTPM: 156.7
Min nTPM: 121.6
RHH5234_R3606
145.8
RHH5206_R3577
125.4
RHH5263_R3635
156.7
RHH5298_R3664
121.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
