HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:15.3 nTPM
HPA Brain:87.9 nTPM
GTEx:15.3 nTPM
FANTOM5:57.5 Scaled Tags Per Million
Pig:69.2 nTPM
Mouse:29.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015055Antibody HPA061646Antibody CAB068177Antibody CAB068178
Glial cells Not detectedHighLowLow
Neuronal cells MediumHighLowMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 87.9
Sample id Sample description nTPM
Hippocampus
nTPM: 82.5
2621 Female, age 67, right hemisphere 105.6
2148 Female, age 91, left hemisphere 87.5
2529 Female, age 94, left hemisphere 81.5
1855 Male, age 76, left hemisphere 78.1
1898 Male, age 80, left hemisphere 71.7
1911 Female, age 85, right hemisphere 70.5
Dentate gyrus
nTPM: 81.7
2531 Female, age 67, both hemispheres 99.5
2530 Female, age 94, left hemisphere 89.5
2246 Female, age 85, both hemispheres 87.7
1927 Female, age 91, both hemispheres 72.4
2010 Male, age 76, both hemispheres 72.4
2528 Male, age 74, both hemispheres 68.8
Entorhinal gyrus
nTPM: 85.3
2613 Female, age 94, left hemisphere 103.5
2686 Male, age 75, right hemisphere 95.1
2764 Male, age 80, right hemisphere 90.3
1787 Male, age 76, left hemisphere 76.4
2117 Female, age 91, right hemisphere 75.0
1938 Female, age 85, left hemisphere 71.5
Hippocampus, CA1
nTPM: 78.2
2749 Male, age 80, left hemisphere 91.2
2527 Male, age 74, both hemispheres 78.3
1873 Female, age 85, both hemispheres 74.5
2045 Male, age 76, both hemispheres 74.1
2082 Female, age 91, right hemisphere 72.7
Hippocampus, CA2
nTPM: 71.9
1940 Female, age 85, left hemisphere 81.2
2437 Female, age 94, left hemisphere 76.2
2113 Female, age 91, right hemisphere 72.6
1963 Male, age 80, left hemisphere 69.4
1892 Male, age 76, both hemispheres 67.4
2249 Male, age 74, both hemispheres 64.5
Hippocampus, CA3
nTPM: 87.4
2620 Female, age 94, left hemisphere 113.6
2861 Female, age 67, both hemispheres 112.0
2137 Male, age 80, left hemisphere 90.9
1867 Male, age 76, both hemispheres 70.2
2436 Male, age 74, both hemispheres 70.1
1891 Female, age 85, both hemispheres 67.7
Parahippocampal cortex
nTPM: 87.9
2622 Female, age 67, right hemisphere 116.5
2245 Female, age 91, both hemispheres 109.7
2532 Female, age 72, left hemisphere 96.5
2693 Female, age 94, both hemispheres 85.9
2692 Male, age 74, both hemispheres 82.7
2018 Male, age 76, both hemispheres 80.7
2250 Female, age 67, right hemisphere 80.1
1850 Male, age 80, both hemispheres 77.1
1933 Female, age 85, both hemispheres 76.8
1990 Female, age 91, right hemisphere 73.0
Perirhinal gyrus
nTPM: 77.6
2521 Female, age 94, right hemisphere 83.0
1841 Female, age 85, right hemisphere 78.3
2848 Male, age 76, right hemisphere 78.0
1794 Male, age 80, right hemisphere 77.2
1847 Female, age 91, left hemisphere 71.8
Subiculum
nTPM: 80.7
2438 Female, age 94, left hemisphere 90.0
2619 Male, age 74, both hemispheres 89.8
2042 Male, age 76, both hemispheres 81.5
1901 Male, age 80, both hemispheres 81.2
1977 Female, age 85, both hemispheres 73.6
2729 Female, age 91, right hemisphere 67.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.3
Samples: 197

Max nTPM: 29.1
Min nTPM: 5.8
Std nTPM: 3.4
Median nTPM: 14.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 29.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 28.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 26.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 25.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 24.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 22.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 22.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 22.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 21.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 21.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 21.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.5
FF:10153-102I9 76 years, female 73.5
FF:10169-103B7 60 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.2
Pig sample Sample description nTPM
Subiculum
nTPM: 69.2
Samples: 4

Max nTPM: 83.5
Min nTPM: 61.8
Sample A Female 83.5
Sample B Female 63.5
Sample C Male 67.9
Sample D Male 61.8
Dorsal hippocampus
nTPM: 66.2
Samples: 4

Max nTPM: 74.4
Min nTPM: 56.2
Sample A Female 74.4
Sample B Female 69.7
Sample C Male 64.6
Sample D Male 56.2
Entorhinal cortex
nTPM: 68.3
Samples: 4

Max nTPM: 77.0
Min nTPM: 57.4
Sample A Female 77.0
Sample B Female 57.4
Sample C Male 67.5
Sample D Male 71.1
Ventral hippocampus
nTPM: 67.1
Samples: 4

Max nTPM: 81.9
Min nTPM: 55.0
Sample A Female 62.9
Sample B Female 55.0
Sample C Male 81.9
Sample D Male 68.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.4
Samples: 4

Max nTPM: 35.8
Min nTPM: 25.8
Sample A Male 25.8
Sample B Male 28.5
Sample C Female 27.6
Sample D Female 35.8
Hippocampal formation
nTPM: 27.0
Samples: 4

Max nTPM: 35.0
Min nTPM: 17.5
Sample A Male 17.5
Sample B Male 30.8
Sample C Female 35.0
Sample D Female 24.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org