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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
79.6
nTPM
FANTOM5:
61.7
Scaled Tags Per Million
Pig:
61.4
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
79.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 69.9
2301
Female, age 85, both hemispheres
88.3
2188
Female, age 91, both hemispheres
65.3
2090
Male, age 80, both hemispheres
63.7
1984
Male, age 76, both hemispheres
62.1
Dorsal cochlear nucleus nTPM: 69.9
2058
Male, age 76, both hemispheres
73.0
2370
Male, age 61, both hemispheres
72.9
2378
Male, age 80, both hemispheres
68.9
2802
Male, age 74, right hemisphere
68.7
2187
Female, age 91, both hemispheres
65.9
Dorsal tegmental nucleus nTPM: 79.6
2358
Male, age 61, both hemispheres
121.7
2083
Male, age 80, both hemispheres
69.9
1936
Male, age 76, left hemisphere
65.0
2326
Male, age 74, both hemispheres
62.0
Dorsolateral tegmental area nTPM: 66.7
2337
Male, age 61, both hemispheres
85.8
2141
Male, age 76, both hemispheres
75.2
2654
Male, age 80, both hemispheres
62.0
2360
Male, age 74, both hemispheres
57.2
2751
Female, age 85, both hemispheres
53.3
Kolliker-Fuse nucleus nTPM: 76.5
2793
Female, age 91, left hemisphere
86.7
2315
Male, age 76, right hemisphere
72.1
2163
Male, age 80, both hemispheres
70.8
Lateral lemniscal nuclei nTPM: 70.7
2453
Male, age 74, right hemisphere
77.8
2320
Female, age 91, left hemisphere
76.7
2169
Male, age 76, both hemispheres
74.4
2036
Male, age 80, both hemispheres
62.4
2746
Female, age 85, left hemisphere
62.3
Lateral parabrachial nucleus nTPM: 71.2
2792
Male, age 76, both hemispheres
79.5
2790
Male, age 61, both hemispheres
77.5
2139
Female, age 85, right hemisphere
69.0
2013
Male, age 80, both hemispheres
58.9
Lateral vestibular nucleus nTPM: 78.3
2184
Male, age 76, both hemispheres
81.5
2311
Male, age 80, both hemispheres
75.1
Locus coeruleus nTPM: 76.3
2720
Male, age 74, both hemispheres
93.2
1980
Male, age 76, both hemispheres
80.1
2162
Male, age 80, both hemispheres
78.0
2014
Male, age 55, unknown
74.4
2317
Female, age 72, unknown
72.3
2788
Male, age 74, unknown
71.8
2123
Female, age 91, both hemispheres
64.5
Medial parabrachial nucleus nTPM: 71.0
2156
Male, age 61, both hemispheres
82.2
2786
Male, age 76, both hemispheres
79.0
2854
Male, age 80, both hemispheres
77.5
2170
Female, age 91, both hemispheres
62.4
2463
Female, age 85, right hemisphere
53.8
Medial periolivary nuclei nTPM: 70.0
2171
Female, age 85, both hemispheres
84.4
2458
Female, age 91, both hemispheres
80.0
2081
Male, age 80, both hemispheres
67.4
2063
Male, age 76, both hemispheres
59.3
2791
Male, age 74, right hemisphere
58.6
Motor facial nucleus nTPM: 76.0
2697
Female, age 85, both hemispheres
98.5
2327
Male, age 80, both hemispheres
88.6
2795
Female, age 91, both hemispheres
79.8
2365
Male, age 74, right hemisphere
72.1
2062
Male, age 76, both hemispheres
58.8
2126
Male, age 61, both hemispheres
58.2
Motor trigeminal nucleus nTPM: 75.9
2321
Female, age 91, both hemispheres
80.4
2309
Male, age 76, both hemispheres
79.2
2335
Male, age 61, both hemispheres
77.3
2079
Male, age 80, both hemispheres
72.6
2560
Male, age 74, both hemispheres
69.8
Nuclei of the trapezoid body nTPM: 68.7
2735
Female, age 85, both hemispheres
77.3
2368
Female, age 91, both hemispheres
74.7
2166
Male, age 80, both hemispheres
71.9
1983
Male, age 76, both hemispheres
60.0
2159
Male, age 61, both hemispheres
59.4
Nucleus raphe magnus nTPM: 76.8
2172
Female, age 85, both hemispheres
100.4
2328
Male, age 80, both hemispheres
82.3
2455
Male, age 74, both hemispheres
74.4
2459
Female, age 91, both hemispheres
74.3
2051
Male, age 76, both hemispheres
66.0
2160
Male, age 61, both hemispheres
63.5
Paramedian reticular nucleus nTPM: 61.9
2050
Female, age 85, both hemispheres
66.8
2313
Male, age 61, both hemispheres
65.6
2057
Male, age 80, both hemispheres
58.3
2052
Male, age 76, both hemispheres
57.1
Pedunculopontine tegmental nucleus nTPM: 71.6
2338
Male, age 61, both hemispheres
83.7
2334
Male, age 80, both hemispheres
70.3
1921
Female, age 85, both hemispheres
60.8
Pontine nuclei nTPM: 66.7
2787
Female, age 85, both hemispheres
88.2
2115
Male, age 80, left hemisphere
75.1
1863
Male, age 55, unknown
71.6
2319
Female, age 91, both hemispheres
66.7
1968
Male, age 76, left hemisphere
64.1
2454
Male, age 74, left hemisphere
61.8
2109
Female, age 72, unknown
58.8
2727
Male, age 61, right hemisphere
47.0
Pontine raphe nucleus nTPM: 69.9
2853
Male, age 76, midline
72.3
2122
Female, age 85, midline
67.6
Posteroventral cochlear nucleus nTPM: 62.2
2070
Male, age 76, both hemispheres
67.9
2371
Male, age 61, both hemispheres
67.9
2752
Female, age 85, both hemispheres
62.2
2135
Female, age 91, both hemispheres
57.3
2341
Male, age 80, both hemispheres
55.7
Principal sensory trigeminal nucleus nTPM: 70.5
2324
Male, age 76, both hemispheres
82.2
2367
Female, age 91, left hemisphere
75.4
2158
Male, age 61, both hemispheres
62.6
2008
Male, age 80, left hemisphere
62.0
Reticular pontine nucleus, caudal nTPM: 73.6
2332
Male, age 80, right hemisphere
94.4
2457
Female, age 91, both hemispheres
74.9
2092
Male, age 76, both hemispheres
64.3
2559
Male, age 74, both hemispheres
60.7
Reticular pontine nucleus, oral nTPM: 64.3
2366
Female, age 91, both hemispheres
82.2
2167
Male, age 76, both hemispheres
71.6
1939
Male, age 80, both hemispheres
60.6
2012
Female, age 85, both hemispheres
57.9
2361
Male, age 74, both hemispheres
49.1
Reticulotegmental nucleus nTPM: 76.9
2333
Male, age 80, both hemispheres
80.4
2325
Male, age 76, both hemispheres
79.2
2322
Female, age 91, both hemispheres
75.2
2452
Male, age 74, both hemispheres
72.9
Spinal trigeminal nucleus, oral nTPM: 71.0
2164
Male, age 80, both hemispheres
78.3
1978
Male, age 76, both hemispheres
69.7
2737
Female, age 85, both hemispheres
64.9
Subcoeruleus area nTPM: 67.9
2323
Female, age 91, left hemisphere
79.6
2089
Male, age 76, left hemisphere
73.7
2451
Male, age 74, both hemispheres
70.2
1958
Male, age 80, both hemispheres
62.0
2369
Female, age 85, left hemisphere
53.8
Superior olive nTPM: 72.0
2561
Female, age 91, both hemispheres
88.7
2329
Male, age 80, right hemisphere
83.7
1875
Female, age 85, both hemispheres
67.1
2364
Male, age 74, right hemisphere
62.2
2020
Male, age 76, both hemispheres
58.1
Ventral periolivary nuclei nTPM: 74.4
2130
Female, age 85, both hemispheres
85.0
2794
Female, age 91, left hemisphere
80.8
2165
Male, age 80, both hemispheres
77.2
2023
Male, age 76, both hemispheres
54.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 75.4
2359
Male, age 61, both hemispheres
84.0
2840
Female, age 85, both hemispheres
83.7
2456
Female, age 91, both hemispheres
75.6
2161
Male, age 80, both hemispheres
72.0
2449
Male, age 74, both hemispheres
71.1
1959
Male, age 76, both hemispheres
66.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
