HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:59.8 nTPM
HPA Brain:85.9 nTPM
GTEx:59.8 nTPM
FANTOM5:74.2 Scaled Tags Per Million
Pig:29.4 nTPM
Mouse:106.2 nTPM
Allen mouse:13.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030047
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 85.9
Sample id Sample description nTPM
Hippocampus
nTPM: 83.5
1898 Male, age 80, left hemisphere 104.4
1911 Female, age 85, right hemisphere 90.1
2529 Female, age 94, left hemisphere 86.6
2621 Female, age 67, right hemisphere 77.5
1855 Male, age 76, left hemisphere 72.1
2148 Female, age 91, left hemisphere 70.2
Dentate gyrus
nTPM: 74.3
2528 Male, age 74, both hemispheres 85.5
2530 Female, age 94, left hemisphere 84.8
2010 Male, age 76, both hemispheres 82.7
2246 Female, age 85, both hemispheres 74.9
1927 Female, age 91, both hemispheres 59.2
2531 Female, age 67, both hemispheres 58.4
Entorhinal gyrus
nTPM: 79.1
2764 Male, age 80, right hemisphere 98.0
1938 Female, age 85, left hemisphere 91.6
2117 Female, age 91, right hemisphere 85.7
1787 Male, age 76, left hemisphere 80.6
2613 Female, age 94, left hemisphere 65.4
2686 Male, age 75, right hemisphere 53.3
Hippocampus, CA1
nTPM: 85.9
2749 Male, age 80, left hemisphere 117.1
2527 Male, age 74, both hemispheres 92.2
1873 Female, age 85, both hemispheres 81.8
2082 Female, age 91, right hemisphere 81.5
2045 Male, age 76, both hemispheres 56.6
Hippocampus, CA2
nTPM: 81.6
2249 Male, age 74, both hemispheres 103.9
1963 Male, age 80, left hemisphere 93.4
2113 Female, age 91, right hemisphere 82.9
1940 Female, age 85, left hemisphere 76.8
2437 Female, age 94, left hemisphere 69.4
1892 Male, age 76, both hemispheres 62.9
Hippocampus, CA3
nTPM: 81.7
2137 Male, age 80, left hemisphere 99.8
2436 Male, age 74, both hemispheres 97.5
1867 Male, age 76, both hemispheres 76.8
2620 Female, age 94, left hemisphere 75.5
1891 Female, age 85, both hemispheres 74.0
2861 Female, age 67, both hemispheres 66.9
Parahippocampal cortex
nTPM: 71.5
1933 Female, age 85, both hemispheres 86.1
2018 Male, age 76, both hemispheres 84.1
2250 Female, age 67, right hemisphere 79.6
1850 Male, age 80, both hemispheres 78.4
2245 Female, age 91, both hemispheres 77.1
2532 Female, age 72, left hemisphere 67.2
1990 Female, age 91, right hemisphere 62.8
2622 Female, age 67, right hemisphere 61.1
2692 Male, age 74, both hemispheres 59.9
2693 Female, age 94, both hemispheres 58.3
Perirhinal gyrus
nTPM: 78.4
1794 Male, age 80, right hemisphere 86.4
2521 Female, age 94, right hemisphere 84.4
1841 Female, age 85, right hemisphere 82.0
1847 Female, age 91, left hemisphere 72.2
2848 Male, age 76, right hemisphere 66.8
Subiculum
nTPM: 75.7
1977 Female, age 85, both hemispheres 95.6
1901 Male, age 80, both hemispheres 87.7
2042 Male, age 76, both hemispheres 80.6
2619 Male, age 74, both hemispheres 75.6
2729 Female, age 91, right hemisphere 67.7
2438 Female, age 94, left hemisphere 46.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.8
Samples: 197

Max nTPM: 111.7
Min nTPM: 16.1
Std nTPM: 20.2
Median nTPM: 56.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 111.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 110.3
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 109.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 109.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 108.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 107.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 105.6
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 103.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 103.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 99.3
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 98.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.2
FF:10153-102I9 76 years, female 80.9
FF:10169-103B7 60 years, female 67.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.4
Pig sample Sample description nTPM
Subiculum
nTPM: 28.5
Samples: 4

Max nTPM: 38.2
Min nTPM: 22.4
Sample A Female 38.2
Sample B Female 26.8
Sample C Male 26.6
Sample D Male 22.4
Dorsal hippocampus
nTPM: 29.4
Samples: 4

Max nTPM: 36.0
Min nTPM: 18.8
Sample A Female 36.0
Sample B Female 28.0
Sample C Male 34.8
Sample D Male 18.8
Entorhinal cortex
nTPM: 23.0
Samples: 4

Max nTPM: 26.8
Min nTPM: 18.1
Sample A Female 26.3
Sample B Female 20.6
Sample C Male 26.8
Sample D Male 18.1
Ventral hippocampus
nTPM: 27.2
Samples: 4

Max nTPM: 34.1
Min nTPM: 21.3
Sample A Female 26.0
Sample B Female 21.3
Sample C Male 34.1
Sample D Male 27.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 106.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 68.4
Samples: 4

Max nTPM: 71.2
Min nTPM: 65.8
Sample A Male 68.3
Sample B Male 65.8
Sample C Female 68.2
Sample D Female 71.2
Hippocampal formation
nTPM: 106.2
Samples: 4

Max nTPM: 119.4
Min nTPM: 85.5
Sample A Male 85.5
Sample B Male 117.4
Sample C Female 119.4
Sample D Female 102.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.6
68341860 Antisense, RP_041207_02_C12, Mouse strain C57BL/6J (56 days, male) 18.4
795 Antisense, RP_Baylor_102958, Mouse strain C57BL/6J (56 days, male) 8.8

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