HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:1581.2 nTPM
HPA Brain:649.8 nTPM
GTEx:1581.2 nTPM
FANTOM5:215.7 Scaled Tags Per Million
Pig:250.2 nTPM
Mouse:717.3 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049719
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 649.8
Sample id Sample description nTPM
Hippocampus
nTPM: 649.8
1898 Male, age 80, left hemisphere 740.4
2529 Female, age 94, left hemisphere 710.6
2621 Female, age 67, right hemisphere 704.2
1911 Female, age 85, right hemisphere 610.9
1855 Male, age 76, left hemisphere 573.1
2148 Female, age 91, left hemisphere 559.3
Dentate gyrus
nTPM: 614.5
2530 Female, age 94, left hemisphere 811.6
2010 Male, age 76, both hemispheres 684.1
2531 Female, age 67, both hemispheres 604.8
2246 Female, age 85, both hemispheres 586.2
1927 Female, age 91, both hemispheres 514.3
2528 Male, age 74, both hemispheres 485.9
Entorhinal gyrus
nTPM: 609.8
2686 Male, age 75, right hemisphere 749.8
2117 Female, age 91, right hemisphere 638.2
1787 Male, age 76, left hemisphere 625.5
1938 Female, age 85, left hemisphere 581.7
2764 Male, age 80, right hemisphere 573.8
2613 Female, age 94, left hemisphere 490.1
Hippocampus, CA1
nTPM: 576.4
2082 Female, age 91, right hemisphere 606.6
2749 Male, age 80, left hemisphere 578.9
2527 Male, age 74, both hemispheres 576.8
2045 Male, age 76, both hemispheres 571.6
1873 Female, age 85, both hemispheres 547.9
Hippocampus, CA2
nTPM: 595.4
1963 Male, age 80, left hemisphere 673.8
2437 Female, age 94, left hemisphere 633.1
1940 Female, age 85, left hemisphere 588.7
2113 Female, age 91, right hemisphere 575.9
1892 Male, age 76, both hemispheres 563.1
2249 Male, age 74, both hemispheres 537.5
Hippocampus, CA3
nTPM: 559.1
1867 Male, age 76, both hemispheres 641.2
1891 Female, age 85, both hemispheres 614.3
2861 Female, age 67, both hemispheres 606.5
2137 Male, age 80, left hemisphere 538.1
2436 Male, age 74, both hemispheres 526.7
2620 Female, age 94, left hemisphere 427.8
Parahippocampal cortex
nTPM: 571.2
2018 Male, age 76, both hemispheres 801.0
2532 Female, age 72, left hemisphere 608.2
2250 Female, age 67, right hemisphere 595.7
2245 Female, age 91, both hemispheres 589.3
2692 Male, age 74, both hemispheres 563.2
1850 Male, age 80, both hemispheres 552.2
1990 Female, age 91, right hemisphere 549.0
1933 Female, age 85, both hemispheres 538.6
2622 Female, age 67, right hemisphere 489.3
2693 Female, age 94, both hemispheres 426.0
Perirhinal gyrus
nTPM: 584.7
1841 Female, age 85, right hemisphere 621.6
1847 Female, age 91, left hemisphere 618.8
1794 Male, age 80, right hemisphere 605.2
2848 Male, age 76, right hemisphere 549.6
2521 Female, age 94, right hemisphere 528.2
Subiculum
nTPM: 626.6
2042 Male, age 76, both hemispheres 718.5
2438 Female, age 94, left hemisphere 702.8
1977 Female, age 85, both hemispheres 633.4
1901 Male, age 80, both hemispheres 604.1
2619 Male, age 74, both hemispheres 570.7
2729 Female, age 91, right hemisphere 529.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1581.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1581.2
Samples: 197

Max nTPM: 3763.5
Min nTPM: 618.4
Std nTPM: 558.5
Median nTPM: 1451.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 3763.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 3535.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 3514.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 3189.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 3013.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2997.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2968.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2802.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 2723.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 2680.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2669.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 215.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 215.7
FF:10169-103B7 60 years, female 274.1
FF:10153-102I9 76 years, female 157.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 250.2
Pig sample Sample description nTPM
Subiculum
nTPM: 206.9
Samples: 4

Max nTPM: 289.4
Min nTPM: 165.5
Sample A Female 289.4
Sample B Female 185.6
Sample C Male 165.5
Sample D Male 186.9
Dorsal hippocampus
nTPM: 250.2
Samples: 4

Max nTPM: 338.2
Min nTPM: 172.4
Sample A Female 338.2
Sample B Female 209.3
Sample C Male 280.9
Sample D Male 172.4
Entorhinal cortex
nTPM: 197.5
Samples: 4

Max nTPM: 222.5
Min nTPM: 148.4
Sample A Female 198.5
Sample B Female 222.5
Sample C Male 220.5
Sample D Male 148.4
Ventral hippocampus
nTPM: 218.1
Samples: 4

Max nTPM: 264.3
Min nTPM: 171.5
Sample A Female 205.6
Sample B Female 171.5
Sample C Male 264.3
Sample D Male 231.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 717.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 685.5
Samples: 4

Max nTPM: 765.5
Min nTPM: 615.8
Sample A Male 672.8
Sample B Male 615.8
Sample C Female 765.5
Sample D Female 688.0
Hippocampal formation
nTPM: 717.3
Samples: 4

Max nTPM: 879.0
Min nTPM: 642.9
Sample A Male 879.0
Sample B Male 642.9
Sample C Female 644.9
Sample D Female 702.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
100143572 Antisense, RP_110407_01_F09, Mouse strain C57BL/6J (56 days, male) 9.5

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