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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
794.2
nTPM
FANTOM5:
187.4
Scaled Tags Per Million
Pig:
302.4
nTPM
Allen mouse:
8.0
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
794.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 794.2
2090
Male, age 80, both hemispheres
904.8
2188
Female, age 91, both hemispheres
855.6
2301
Female, age 85, both hemispheres
792.3
1984
Male, age 76, both hemispheres
624.3
Dorsal cochlear nucleus nTPM: 718.8
2187
Female, age 91, both hemispheres
816.7
2802
Male, age 74, right hemisphere
797.2
2378
Male, age 80, both hemispheres
705.2
2370
Male, age 61, both hemispheres
681.3
2058
Male, age 76, both hemispheres
593.6
Dorsal tegmental nucleus nTPM: 784.6
2358
Male, age 61, both hemispheres
845.8
2326
Male, age 74, both hemispheres
822.2
2083
Male, age 80, both hemispheres
802.4
1936
Male, age 76, left hemisphere
667.9
Dorsolateral tegmental area nTPM: 753.8
2337
Male, age 61, both hemispheres
962.6
2654
Male, age 80, both hemispheres
865.4
2751
Female, age 85, both hemispheres
693.4
2141
Male, age 76, both hemispheres
628.3
2360
Male, age 74, both hemispheres
619.2
Kolliker-Fuse nucleus nTPM: 788.3
2315
Male, age 76, right hemisphere
887.6
2793
Female, age 91, left hemisphere
790.1
2163
Male, age 80, both hemispheres
687.3
Lateral lemniscal nuclei nTPM: 568.3
2746
Female, age 85, left hemisphere
610.6
2169
Male, age 76, both hemispheres
592.8
2320
Female, age 91, left hemisphere
592.7
2453
Male, age 74, right hemisphere
524.7
2036
Male, age 80, both hemispheres
520.4
Lateral parabrachial nucleus nTPM: 792.8
2792
Male, age 76, both hemispheres
972.8
2013
Male, age 80, both hemispheres
848.0
2139
Female, age 85, right hemisphere
714.9
2790
Male, age 61, both hemispheres
635.6
Lateral vestibular nucleus nTPM: 738.1
2311
Male, age 80, both hemispheres
869.1
2184
Male, age 76, both hemispheres
607.1
Locus coeruleus nTPM: 626.3
2720
Male, age 74, both hemispheres
772.0
2123
Female, age 91, both hemispheres
699.2
2162
Male, age 80, both hemispheres
683.2
2317
Female, age 72, unknown
597.7
2014
Male, age 55, unknown
578.2
1980
Male, age 76, both hemispheres
575.7
2788
Male, age 74, unknown
478.1
Medial parabrachial nucleus nTPM: 728.7
2170
Female, age 91, both hemispheres
819.7
2854
Male, age 80, both hemispheres
757.5
2156
Male, age 61, both hemispheres
706.2
2786
Male, age 76, both hemispheres
684.8
2463
Female, age 85, right hemisphere
675.4
Medial periolivary nuclei nTPM: 623.4
2081
Male, age 80, both hemispheres
726.7
2063
Male, age 76, both hemispheres
664.8
2458
Female, age 91, both hemispheres
638.6
2791
Male, age 74, right hemisphere
576.7
2171
Female, age 85, both hemispheres
510.4
Motor facial nucleus nTPM: 632.9
2126
Male, age 61, both hemispheres
740.0
2697
Female, age 85, both hemispheres
674.0
2795
Female, age 91, both hemispheres
667.0
2365
Male, age 74, right hemisphere
645.3
2062
Male, age 76, both hemispheres
605.5
2327
Male, age 80, both hemispheres
465.8
Motor trigeminal nucleus nTPM: 661.7
2335
Male, age 61, both hemispheres
748.1
2321
Female, age 91, both hemispheres
678.5
2309
Male, age 76, both hemispheres
675.0
2560
Male, age 74, both hemispheres
629.8
2079
Male, age 80, both hemispheres
577.0
Nuclei of the trapezoid body nTPM: 599.2
1983
Male, age 76, both hemispheres
759.6
2166
Male, age 80, both hemispheres
639.6
2159
Male, age 61, both hemispheres
565.3
2368
Female, age 91, both hemispheres
538.5
2735
Female, age 85, both hemispheres
492.9
Nucleus raphe magnus nTPM: 573.3
2051
Male, age 76, both hemispheres
626.8
2459
Female, age 91, both hemispheres
601.6
2455
Male, age 74, both hemispheres
589.9
2328
Male, age 80, both hemispheres
571.3
2172
Female, age 85, both hemispheres
541.6
2160
Male, age 61, both hemispheres
508.6
Paramedian reticular nucleus nTPM: 665.3
2052
Male, age 76, both hemispheres
714.0
2057
Male, age 80, both hemispheres
672.5
2313
Male, age 61, both hemispheres
655.2
2050
Female, age 85, both hemispheres
619.3
Pedunculopontine tegmental nucleus nTPM: 736.8
2338
Male, age 61, both hemispheres
875.7
2334
Male, age 80, both hemispheres
758.5
1921
Female, age 85, both hemispheres
576.2
Pontine nuclei nTPM: 661.5
2319
Female, age 91, both hemispheres
781.7
1863
Male, age 55, unknown
697.6
2115
Male, age 80, left hemisphere
692.3
1968
Male, age 76, left hemisphere
673.2
2454
Male, age 74, left hemisphere
663.1
2787
Female, age 85, both hemispheres
645.4
2109
Female, age 72, unknown
632.7
2727
Male, age 61, right hemisphere
505.9
Pontine raphe nucleus nTPM: 599.8
2853
Male, age 76, midline
604.9
2122
Female, age 85, midline
594.8
Posteroventral cochlear nucleus nTPM: 787.7
2135
Female, age 91, both hemispheres
929.0
2341
Male, age 80, both hemispheres
907.3
2371
Male, age 61, both hemispheres
742.5
2070
Male, age 76, both hemispheres
709.1
2752
Female, age 85, both hemispheres
650.5
Principal sensory trigeminal nucleus nTPM: 590.2
2367
Female, age 91, left hemisphere
687.9
2324
Male, age 76, both hemispheres
606.4
2158
Male, age 61, both hemispheres
572.3
2008
Male, age 80, left hemisphere
494.3
Reticular pontine nucleus, caudal nTPM: 642.7
2092
Male, age 76, both hemispheres
719.3
2559
Male, age 74, both hemispheres
691.3
2457
Female, age 91, both hemispheres
679.5
2332
Male, age 80, right hemisphere
480.7
Reticular pontine nucleus, oral nTPM: 668.4
2366
Female, age 91, both hemispheres
800.0
1939
Male, age 80, both hemispheres
733.2
2167
Male, age 76, both hemispheres
715.5
2012
Female, age 85, both hemispheres
556.2
2361
Male, age 74, both hemispheres
537.2
Reticulotegmental nucleus nTPM: 676.6
2452
Male, age 74, both hemispheres
754.3
2322
Female, age 91, both hemispheres
696.1
2333
Male, age 80, both hemispheres
661.8
2325
Male, age 76, both hemispheres
594.3
Spinal trigeminal nucleus, oral nTPM: 620.4
2164
Male, age 80, both hemispheres
678.2
1978
Male, age 76, both hemispheres
615.0
2737
Female, age 85, both hemispheres
568.0
Subcoeruleus area nTPM: 675.4
2451
Male, age 74, both hemispheres
788.6
2369
Female, age 85, left hemisphere
729.4
1958
Male, age 80, both hemispheres
659.7
2323
Female, age 91, left hemisphere
632.2
2089
Male, age 76, left hemisphere
567.0
Superior olive nTPM: 616.4
2020
Male, age 76, both hemispheres
733.5
2561
Female, age 91, both hemispheres
666.2
2364
Male, age 74, right hemisphere
606.9
2329
Male, age 80, right hemisphere
542.5
1875
Female, age 85, both hemispheres
533.1
Ventral periolivary nuclei nTPM: 635.8
2023
Male, age 76, both hemispheres
758.5
2794
Female, age 91, left hemisphere
646.9
2165
Male, age 80, both hemispheres
575.2
2130
Female, age 85, both hemispheres
562.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 647.5
2359
Male, age 61, both hemispheres
704.7
2840
Female, age 85, both hemispheres
702.3
2161
Male, age 80, both hemispheres
672.5
1959
Male, age 76, both hemispheres
659.5
2456
Female, age 91, both hemispheres
604.1
2449
Male, age 74, both hemispheres
541.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
302.4
Pig sample
Sample description
nTPM
Pons nTPM: 302.4
Samples: 4
Max nTPM: 354.5
Min nTPM: 205.3
Sample A
Female
300.0
Sample B
Female
205.3
Sample C
Male
354.5
Sample D
Male
349.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
