HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:145.9 nTPM
HPA Brain:109.5 nTPM
GTEx:145.9 nTPM
FANTOM5:410.3 Scaled Tags Per Million
Pig:144.2 nTPM
Mouse:270.0 nTPM
Allen mouse:21.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061638Antibody CAB022345
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 109.5
Sample id Sample description nTPM
Hippocampus
nTPM: 71.3
1898 Male, age 80, left hemisphere 119.2
1911 Female, age 85, right hemisphere 78.9
1855 Male, age 76, left hemisphere 76.0
2621 Female, age 67, right hemisphere 69.9
2529 Female, age 94, left hemisphere 42.2
2148 Female, age 91, left hemisphere 41.6
Dentate gyrus
nTPM: 63.9
1927 Female, age 91, both hemispheres 94.1
2010 Male, age 76, both hemispheres 94.0
2530 Female, age 94, left hemisphere 71.4
2246 Female, age 85, both hemispheres 55.8
2528 Male, age 74, both hemispheres 47.0
2531 Female, age 67, both hemispheres 21.3
Entorhinal gyrus
nTPM: 69.2
2764 Male, age 80, right hemisphere 88.0
2613 Female, age 94, left hemisphere 86.5
1938 Female, age 85, left hemisphere 84.6
1787 Male, age 76, left hemisphere 68.4
2686 Male, age 75, right hemisphere 45.3
2117 Female, age 91, right hemisphere 42.0
Hippocampus, CA1
nTPM: 103.6
2749 Male, age 80, left hemisphere 290.9
1873 Female, age 85, both hemispheres 99.0
2527 Male, age 74, both hemispheres 64.1
2082 Female, age 91, right hemisphere 38.2
2045 Male, age 76, both hemispheres 25.9
Hippocampus, CA2
nTPM: 82.9
1963 Male, age 80, left hemisphere 139.5
1892 Male, age 76, both hemispheres 130.2
2249 Male, age 74, both hemispheres 65.0
2437 Female, age 94, left hemisphere 64.3
1940 Female, age 85, left hemisphere 51.4
2113 Female, age 91, right hemisphere 47.1
Hippocampus, CA3
nTPM: 90.4
2137 Male, age 80, left hemisphere 262.1
1867 Male, age 76, both hemispheres 91.4
2436 Male, age 74, both hemispheres 61.4
1891 Female, age 85, both hemispheres 61.1
2861 Female, age 67, both hemispheres 43.1
2620 Female, age 94, left hemisphere 23.1
Parahippocampal cortex
nTPM: 80.2
1850 Male, age 80, both hemispheres 135.9
2245 Female, age 91, both hemispheres 98.7
2250 Female, age 67, right hemisphere 91.2
2532 Female, age 72, left hemisphere 83.9
1933 Female, age 85, both hemispheres 82.0
1990 Female, age 91, right hemisphere 77.1
2693 Female, age 94, both hemispheres 69.9
2622 Female, age 67, right hemisphere 60.5
2018 Male, age 76, both hemispheres 59.8
2692 Male, age 74, both hemispheres 43.2
Perirhinal gyrus
nTPM: 109.5
1841 Female, age 85, right hemisphere 130.6
1794 Male, age 80, right hemisphere 125.5
1847 Female, age 91, left hemisphere 116.9
2521 Female, age 94, right hemisphere 94.1
2848 Male, age 76, right hemisphere 80.5
Subiculum
nTPM: 68.3
1901 Male, age 80, both hemispheres 124.7
2042 Male, age 76, both hemispheres 72.8
1977 Female, age 85, both hemispheres 69.3
2438 Female, age 94, left hemisphere 67.6
2619 Male, age 74, both hemispheres 40.4
2729 Female, age 91, right hemisphere 34.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 145.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 145.9
Samples: 197

Max nTPM: 517.7
Min nTPM: 32.7
Std nTPM: 96.2
Median nTPM: 125.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 517.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 465.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 452.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 424.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 407.9
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 397.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 361.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 354.3
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 352.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 350.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 347.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 410.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 410.3
FF:10169-103B7 60 years, female 603.4
FF:10153-102I9 76 years, female 217.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 144.2
Pig sample Sample description nTPM
Subiculum
nTPM: 78.4
Samples: 4

Max nTPM: 117.4
Min nTPM: 58.2
Sample A Female 117.4
Sample B Female 74.5
Sample C Male 63.5
Sample D Male 58.2
Dorsal hippocampus
nTPM: 80.3
Samples: 4

Max nTPM: 116.2
Min nTPM: 38.9
Sample A Female 116.2
Sample B Female 85.6
Sample C Male 80.4
Sample D Male 38.9
Entorhinal cortex
nTPM: 144.2
Samples: 4

Max nTPM: 160.2
Min nTPM: 128.4
Sample A Female 154.7
Sample B Female 160.2
Sample C Male 128.4
Sample D Male 133.5
Ventral hippocampus
nTPM: 76.3
Samples: 4

Max nTPM: 98.4
Min nTPM: 51.4
Sample A Female 81.2
Sample B Female 51.4
Sample C Male 74.2
Sample D Male 98.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 270.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 270.0
Samples: 4

Max nTPM: 307.3
Min nTPM: 223.1
Sample A Male 257.1
Sample B Male 307.3
Sample C Female 223.1
Sample D Female 292.3
Hippocampal formation
nTPM: 201.6
Samples: 4

Max nTPM: 249.6
Min nTPM: 174.4
Sample A Male 249.6
Sample B Male 204.3
Sample C Female 174.4
Sample D Female 178.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.2
2385 Antisense, RP_040324_01_A06, Mouse strain C57BL/6J (56 days, male) 21.2
2386 Antisense, RP_040324_01_A06, Mouse strain C57BL/6J (56 days, male) 18.3

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