HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:194.3 nTPM
HPA Brain:178.7 nTPM
GTEx:194.3 nTPM
FANTOM5:212.7 Scaled Tags Per Million
Pig:131.6 nTPM
Mouse:174.4 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA077929
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 178.7
Sample id Sample description nTPM
Hippocampus
nTPM: 142.2
1898 Male, age 80, left hemisphere 181.6
2529 Female, age 94, left hemisphere 148.7
2621 Female, age 67, right hemisphere 139.8
1855 Male, age 76, left hemisphere 137.1
1911 Female, age 85, right hemisphere 128.0
2148 Female, age 91, left hemisphere 118.2
Dentate gyrus
nTPM: 137.6
1927 Female, age 91, both hemispheres 152.4
2010 Male, age 76, both hemispheres 148.8
2528 Male, age 74, both hemispheres 144.4
2530 Female, age 94, left hemisphere 136.4
2246 Female, age 85, both hemispheres 131.6
2531 Female, age 67, both hemispheres 112.0
Entorhinal gyrus
nTPM: 141.8
1938 Female, age 85, left hemisphere 162.8
1787 Male, age 76, left hemisphere 159.5
2764 Male, age 80, right hemisphere 154.3
2613 Female, age 94, left hemisphere 127.8
2117 Female, age 91, right hemisphere 125.5
2686 Male, age 75, right hemisphere 120.9
Hippocampus, CA1
nTPM: 146.5
2749 Male, age 80, left hemisphere 191.7
2527 Male, age 74, both hemispheres 155.9
1873 Female, age 85, both hemispheres 137.0
2082 Female, age 91, right hemisphere 133.0
2045 Male, age 76, both hemispheres 114.8
Hippocampus, CA2
nTPM: 152.8
1892 Male, age 76, both hemispheres 197.6
2249 Male, age 74, both hemispheres 168.2
2437 Female, age 94, left hemisphere 149.7
1963 Male, age 80, left hemisphere 146.1
2113 Female, age 91, right hemisphere 127.6
1940 Female, age 85, left hemisphere 127.5
Hippocampus, CA3
nTPM: 144.0
1867 Male, age 76, both hemispheres 174.7
2436 Male, age 74, both hemispheres 160.0
2137 Male, age 80, left hemisphere 148.0
1891 Female, age 85, both hemispheres 144.4
2620 Female, age 94, left hemisphere 134.9
2861 Female, age 67, both hemispheres 101.7
Parahippocampal cortex
nTPM: 158.8
2250 Female, age 67, right hemisphere 191.9
1850 Male, age 80, both hemispheres 188.7
1933 Female, age 85, both hemispheres 185.7
1990 Female, age 91, right hemisphere 162.8
2693 Female, age 94, both hemispheres 161.8
2018 Male, age 76, both hemispheres 145.9
2532 Female, age 72, left hemisphere 144.1
2245 Female, age 91, both hemispheres 143.7
2692 Male, age 74, both hemispheres 142.8
2622 Female, age 67, right hemisphere 120.1
Perirhinal gyrus
nTPM: 178.7
1847 Female, age 91, left hemisphere 229.2
1794 Male, age 80, right hemisphere 179.6
1841 Female, age 85, right hemisphere 176.2
2848 Male, age 76, right hemisphere 154.3
2521 Female, age 94, right hemisphere 153.9
Subiculum
nTPM: 149.6
1977 Female, age 85, both hemispheres 168.3
2438 Female, age 94, left hemisphere 163.3
2619 Male, age 74, both hemispheres 154.4
1901 Male, age 80, both hemispheres 154.3
2042 Male, age 76, both hemispheres 131.1
2729 Female, age 91, right hemisphere 126.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 194.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 194.3
Samples: 197

Max nTPM: 469.1
Min nTPM: 66.5
Std nTPM: 64.2
Median nTPM: 184.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 469.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 441.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 400.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 382.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 352.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 344.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 341.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 334.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 321.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 318.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 316.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 212.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 212.7
FF:10169-103B7 60 years, female 271.0
FF:10153-102I9 76 years, female 154.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 131.6
Pig sample Sample description nTPM
Subiculum
nTPM: 118.4
Samples: 4

Max nTPM: 148.4
Min nTPM: 107.6
Sample A Female 148.4
Sample B Female 107.6
Sample C Male 108.0
Sample D Male 109.4
Dorsal hippocampus
nTPM: 128.7
Samples: 4

Max nTPM: 177.9
Min nTPM: 70.7
Sample A Female 177.9
Sample B Female 118.4
Sample C Male 147.9
Sample D Male 70.7
Entorhinal cortex
nTPM: 114.3
Samples: 4

Max nTPM: 143.0
Min nTPM: 86.7
Sample A Female 103.3
Sample B Female 143.0
Sample C Male 124.0
Sample D Male 86.7
Ventral hippocampus
nTPM: 131.6
Samples: 4

Max nTPM: 156.5
Min nTPM: 99.3
Sample A Female 156.5
Sample B Female 99.3
Sample C Male 155.5
Sample D Male 114.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 174.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 174.4
Samples: 4

Max nTPM: 186.4
Min nTPM: 160.0
Sample A Male 160.0
Sample B Male 182.6
Sample C Female 168.7
Sample D Female 186.4
Hippocampal formation
nTPM: 131.8
Samples: 4

Max nTPM: 166.7
Min nTPM: 109.4
Sample A Male 166.7
Sample B Male 109.4
Sample C Female 117.9
Sample D Female 133.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
71015350 Antisense, RP_050725_02_G06, Mouse strain C57BL/6J (56 days, male) 6.1
68441640 Antisense, RP_041214_02_G04, Mouse strain C57BL/6J (56 days, male) 4.2

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