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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
13.6
nTPM
HPA Brain:
25.9
nTPM
GTEx:
13.6
nTPM
FANTOM5:
26.8
Scaled Tags Per Million
Pig:
28.4
nTPM
Mouse:
29.3
nTPM
Allen mouse:
2.5
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
13.6
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 13.6
Samples: 197
Max nTPM: 28.8
Min nTPM: 5.7
Std nTPM: 3.1
Median nTPM: 13.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
28.8
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
21.9
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
21.1
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
21.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
20.8
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
20.2
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
19.9
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
19.4
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
19.3
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
19.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
19.1
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
18.5
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
18.5
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
18.4
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
18.4
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
18.2
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
18.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
18.0
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
17.9
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
17.6
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
17.6
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
17.5
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
17.4
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
17.2
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
16.8
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
16.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
16.6
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
16.6
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
16.6
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
16.5
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
16.5
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
16.3
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
16.3
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
16.3
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
16.2
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
16.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
16.1
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
16.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
15.9
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
15.8
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
15.8
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
15.7
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
15.7
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
15.6
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
15.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
15.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
15.6
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
15.5
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
15.5
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
15.3
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
15.3
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
15.2
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
15.2
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
15.2
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
15.1
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
15.1
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
15.1
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
15.0
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
15.0
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
14.9
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
14.8
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
14.7
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
14.6
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
14.6
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
14.6
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
14.5
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
14.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
14.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
14.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
14.4
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
14.4
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
14.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
14.2
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
14.1
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
14.1
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
14.1
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
14.1
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
14.1
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
14.0
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
13.9
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
13.9
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
13.8
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
13.8
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
13.8
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
13.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
13.7
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
13.7
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
13.6
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
13.6
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
13.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
13.6
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
13.6
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
13.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
13.5
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
13.5
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
13.4
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
13.4
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
13.4
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
13.3
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
13.3
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
13.3
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
13.2
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
13.2
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
13.2
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
13.2
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
13.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
13.1
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
13.1
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
13.0
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
13.0
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
12.9
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
12.9
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
12.8
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
12.8
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
12.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
12.7
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
12.7
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
12.7
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
12.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
12.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
12.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
12.5
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
12.4
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
12.4
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
12.4
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
12.4
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
12.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
12.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
12.4
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
12.3
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
12.3
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
12.2
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
12.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
12.1
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
12.1
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
12.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
12.1
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
12.1
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
12.1
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
12.0
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
12.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
11.9
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
11.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
11.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
11.6
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
11.6
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
11.6
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
11.6
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
11.5
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
11.5
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
11.5
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
11.3
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
11.3
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
11.3
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
11.3
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
11.3
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
11.2
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
11.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
11.2
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
11.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
11.0
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
10.8
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
10.6
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
10.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
10.6
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
10.6
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
10.5
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
10.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
10.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
10.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
10.3
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
10.3
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
10.3
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
10.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
10.1
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
10.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
9.9
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
9.9
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
9.8
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
9.7
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
9.6
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
9.4
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
9.4
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
9.4
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
9.3
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
9.3
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
9.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
9.2
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
9.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
9.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
8.9
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
8.9
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
8.8
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
7.5
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
7.3
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
6.3
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
5.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
29.3
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 29.2
Samples: 4
Max nTPM: 32.5
Min nTPM: 26.7
Sample A
Male
26.7
Sample B
Male
27.9
Sample C
Female
29.5
Sample D
Female
32.5
Hippocampal formation nTPM: 29.3
Samples: 4
Max nTPM: 30.8
Min nTPM: 27.5
Sample A
Male
27.5
Sample B
Male
28.7
Sample C
Female
30.1
Sample D
Female
30.8
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.