HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:51.2 nTPM
HPA Brain:165.4 nTPM
GTEx:51.2 nTPM
FANTOM5:240.9 Scaled Tags Per Million
Pig:31.8 nTPM
Mouse:11.8 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030273
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 165.4
Sample id Sample description nTPM
Hippocampus
nTPM: 164.0
2148 Female, age 91, left hemisphere 192.0
1855 Male, age 76, left hemisphere 185.9
2529 Female, age 94, left hemisphere 181.6
1898 Male, age 80, left hemisphere 170.7
1911 Female, age 85, right hemisphere 136.0
2621 Female, age 67, right hemisphere 117.9
Dentate gyrus
nTPM: 148.6
2528 Male, age 74, both hemispheres 184.1
2010 Male, age 76, both hemispheres 182.1
2530 Female, age 94, left hemisphere 160.4
2246 Female, age 85, both hemispheres 154.4
2531 Female, age 67, both hemispheres 106.5
1927 Female, age 91, both hemispheres 104.1
Entorhinal gyrus
nTPM: 143.1
2117 Female, age 91, right hemisphere 219.8
1787 Male, age 76, left hemisphere 157.6
2686 Male, age 75, right hemisphere 157.2
2764 Male, age 80, right hemisphere 118.5
1938 Female, age 85, left hemisphere 110.2
2613 Female, age 94, left hemisphere 95.1
Hippocampus, CA1
nTPM: 133.7
2527 Male, age 74, both hemispheres 157.4
2082 Female, age 91, right hemisphere 148.1
1873 Female, age 85, both hemispheres 139.0
2045 Male, age 76, both hemispheres 133.3
2749 Male, age 80, left hemisphere 90.8
Hippocampus, CA2
nTPM: 141.7
1940 Female, age 85, left hemisphere 175.2
2249 Male, age 74, both hemispheres 158.7
2113 Female, age 91, right hemisphere 150.8
1963 Male, age 80, left hemisphere 146.1
2437 Female, age 94, left hemisphere 127.0
1892 Male, age 76, both hemispheres 92.3
Hippocampus, CA3
nTPM: 136.3
2436 Male, age 74, both hemispheres 172.0
2861 Female, age 67, both hemispheres 155.9
1891 Female, age 85, both hemispheres 153.8
2620 Female, age 94, left hemisphere 118.0
1867 Male, age 76, both hemispheres 113.2
2137 Male, age 80, left hemisphere 104.8
Parahippocampal cortex
nTPM: 123.3
2692 Male, age 74, both hemispheres 179.6
2018 Male, age 76, both hemispheres 156.6
2622 Female, age 67, right hemisphere 127.3
2250 Female, age 67, right hemisphere 120.6
1990 Female, age 91, right hemisphere 117.1
2245 Female, age 91, both hemispheres 114.4
1850 Male, age 80, both hemispheres 108.5
1933 Female, age 85, both hemispheres 107.8
2532 Female, age 72, left hemisphere 103.6
2693 Female, age 94, both hemispheres 97.1
Perirhinal gyrus
nTPM: 95.6
2521 Female, age 94, right hemisphere 104.3
2848 Male, age 76, right hemisphere 99.2
1794 Male, age 80, right hemisphere 94.9
1847 Female, age 91, left hemisphere 92.0
1841 Female, age 85, right hemisphere 87.5
Subiculum
nTPM: 165.4
2729 Female, age 91, right hemisphere 216.6
2042 Male, age 76, both hemispheres 197.3
2619 Male, age 74, both hemispheres 166.0
1901 Male, age 80, both hemispheres 148.6
2438 Female, age 94, left hemisphere 139.7
1977 Female, age 85, both hemispheres 124.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.2
Samples: 197

Max nTPM: 165.4
Min nTPM: 17.1
Std nTPM: 22.0
Median nTPM: 48.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 165.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 117.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 117.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 107.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 99.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 98.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 97.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 96.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 95.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 94.8
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 94.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 240.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 240.9
FF:10169-103B7 60 years, female 271.0
FF:10153-102I9 76 years, female 210.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.8
Pig sample Sample description nTPM
Subiculum
nTPM: 29.0
Samples: 4

Max nTPM: 33.6
Min nTPM: 21.7
Sample A Female 33.6
Sample B Female 31.1
Sample C Male 29.6
Sample D Male 21.7
Dorsal hippocampus
nTPM: 24.4
Samples: 4

Max nTPM: 30.8
Min nTPM: 14.9
Sample A Female 30.8
Sample B Female 26.0
Sample C Male 25.9
Sample D Male 14.9
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 21.4
Min nTPM: 14.4
Sample A Female 21.4
Sample B Female 18.1
Sample C Male 20.8
Sample D Male 14.4
Ventral hippocampus
nTPM: 31.8
Samples: 4

Max nTPM: 43.4
Min nTPM: 22.7
Sample A Female 34.9
Sample B Female 26.1
Sample C Male 43.4
Sample D Male 22.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.1
Samples: 4

Max nTPM: 9.1
Min nTPM: 6.4
Sample A Male 7.9
Sample B Male 6.4
Sample C Female 8.9
Sample D Female 9.1
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 12.6
Min nTPM: 10.0
Sample A Male 10.0
Sample B Male 12.1
Sample C Female 12.6
Sample D Female 12.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69735640 Antisense, RP_050503_03_B11, Mouse strain C57BL/6J (56 days, male) 0.5
73520992 Antisense, RP_051101_02_G11, Mouse strain C57BL/6J (56 days, male) 0.0

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