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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
246.7
nTPM
FANTOM5:
288.3
Scaled Tags Per Million
Pig:
49.6
nTPM
Allen mouse:
0.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
246.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 176.8
2301
Female, age 85, both hemispheres
186.9
1984
Male, age 76, both hemispheres
181.0
2090
Male, age 80, both hemispheres
180.5
2188
Female, age 91, both hemispheres
158.8
Dorsal cochlear nucleus nTPM: 246.7
2802
Male, age 74, right hemisphere
305.0
2370
Male, age 61, both hemispheres
271.8
2378
Male, age 80, both hemispheres
257.1
2058
Male, age 76, both hemispheres
238.7
2187
Female, age 91, both hemispheres
160.8
Dorsal tegmental nucleus nTPM: 215.3
1936
Male, age 76, left hemisphere
221.5
2083
Male, age 80, both hemispheres
217.6
2326
Male, age 74, both hemispheres
216.1
2358
Male, age 61, both hemispheres
206.0
Dorsolateral tegmental area nTPM: 205.6
2337
Male, age 61, both hemispheres
229.1
2654
Male, age 80, both hemispheres
220.3
2751
Female, age 85, both hemispheres
201.8
2360
Male, age 74, both hemispheres
195.9
2141
Male, age 76, both hemispheres
181.0
Kolliker-Fuse nucleus nTPM: 244.3
2315
Male, age 76, right hemisphere
373.4
2163
Male, age 80, both hemispheres
186.4
2793
Female, age 91, left hemisphere
173.0
Lateral lemniscal nuclei nTPM: 167.6
2453
Male, age 74, right hemisphere
207.9
2746
Female, age 85, left hemisphere
177.7
2169
Male, age 76, both hemispheres
155.8
2320
Female, age 91, left hemisphere
152.1
2036
Male, age 80, both hemispheres
144.6
Lateral parabrachial nucleus nTPM: 226.8
2790
Male, age 61, both hemispheres
251.0
2792
Male, age 76, both hemispheres
246.2
2139
Female, age 85, right hemisphere
215.5
2013
Male, age 80, both hemispheres
194.5
Lateral vestibular nucleus nTPM: 210.9
2311
Male, age 80, both hemispheres
214.3
2184
Male, age 76, both hemispheres
207.5
Locus coeruleus nTPM: 158.3
2317
Female, age 72, unknown
214.6
1980
Male, age 76, both hemispheres
172.6
2788
Male, age 74, unknown
154.5
2123
Female, age 91, both hemispheres
150.7
2162
Male, age 80, both hemispheres
150.5
2014
Male, age 55, unknown
140.9
2720
Male, age 74, both hemispheres
124.0
Medial parabrachial nucleus nTPM: 187.9
2156
Male, age 61, both hemispheres
229.5
2463
Female, age 85, right hemisphere
197.6
2786
Male, age 76, both hemispheres
197.3
2854
Male, age 80, both hemispheres
166.9
2170
Female, age 91, both hemispheres
148.3
Medial periolivary nuclei nTPM: 187.1
2081
Male, age 80, both hemispheres
198.8
2791
Male, age 74, right hemisphere
192.4
2458
Female, age 91, both hemispheres
187.6
2171
Female, age 85, both hemispheres
183.8
2063
Male, age 76, both hemispheres
172.7
Motor facial nucleus nTPM: 195.9
2795
Female, age 91, both hemispheres
299.2
2126
Male, age 61, both hemispheres
208.8
2062
Male, age 76, both hemispheres
189.9
2365
Male, age 74, right hemisphere
176.6
2697
Female, age 85, both hemispheres
152.6
2327
Male, age 80, both hemispheres
148.4
Motor trigeminal nucleus nTPM: 178.2
2309
Male, age 76, both hemispheres
200.8
2560
Male, age 74, both hemispheres
189.0
2335
Male, age 61, both hemispheres
181.3
2079
Male, age 80, both hemispheres
161.8
2321
Female, age 91, both hemispheres
158.0
Nuclei of the trapezoid body nTPM: 183.2
2368
Female, age 91, both hemispheres
240.0
1983
Male, age 76, both hemispheres
187.6
2735
Female, age 85, both hemispheres
179.8
2166
Male, age 80, both hemispheres
169.4
2159
Male, age 61, both hemispheres
139.4
Nucleus raphe magnus nTPM: 176.4
2051
Male, age 76, both hemispheres
227.1
2459
Female, age 91, both hemispheres
194.4
2328
Male, age 80, both hemispheres
173.3
2455
Male, age 74, both hemispheres
173.1
2172
Female, age 85, both hemispheres
156.1
2160
Male, age 61, both hemispheres
134.5
Paramedian reticular nucleus nTPM: 177.7
2057
Male, age 80, both hemispheres
196.6
2313
Male, age 61, both hemispheres
174.1
2050
Female, age 85, both hemispheres
170.2
2052
Male, age 76, both hemispheres
169.9
Pedunculopontine tegmental nucleus nTPM: 186.3
2338
Male, age 61, both hemispheres
197.0
1921
Female, age 85, both hemispheres
183.8
2334
Male, age 80, both hemispheres
178.0
Pontine nuclei nTPM: 171.0
1863
Male, age 55, unknown
194.0
2109
Female, age 72, unknown
192.4
2787
Female, age 85, both hemispheres
187.8
2115
Male, age 80, left hemisphere
179.9
1968
Male, age 76, left hemisphere
178.7
2727
Male, age 61, right hemisphere
147.2
2454
Male, age 74, left hemisphere
144.4
2319
Female, age 91, both hemispheres
143.2
Pontine raphe nucleus nTPM: 173.6
2853
Male, age 76, midline
178.1
2122
Female, age 85, midline
169.1
Posteroventral cochlear nucleus nTPM: 188.8
2371
Male, age 61, both hemispheres
248.5
2341
Male, age 80, both hemispheres
180.9
2070
Male, age 76, both hemispheres
180.1
2752
Female, age 85, both hemispheres
178.4
2135
Female, age 91, both hemispheres
155.8
Principal sensory trigeminal nucleus nTPM: 169.1
2324
Male, age 76, both hemispheres
239.7
2008
Male, age 80, left hemisphere
154.6
2367
Female, age 91, left hemisphere
142.8
2158
Male, age 61, both hemispheres
139.4
Reticular pontine nucleus, caudal nTPM: 190.0
2457
Female, age 91, both hemispheres
213.7
2092
Male, age 76, both hemispheres
204.1
2332
Male, age 80, right hemisphere
180.4
2559
Male, age 74, both hemispheres
161.6
Reticular pontine nucleus, oral nTPM: 169.8
1939
Male, age 80, both hemispheres
208.5
2167
Male, age 76, both hemispheres
181.7
2012
Female, age 85, both hemispheres
173.2
2366
Female, age 91, both hemispheres
143.3
2361
Male, age 74, both hemispheres
142.5
Reticulotegmental nucleus nTPM: 216.8
2333
Male, age 80, both hemispheres
249.8
2322
Female, age 91, both hemispheres
232.0
2452
Male, age 74, both hemispheres
216.2
2325
Male, age 76, both hemispheres
169.0
Spinal trigeminal nucleus, oral nTPM: 175.9
2164
Male, age 80, both hemispheres
199.1
1978
Male, age 76, both hemispheres
168.0
2737
Female, age 85, both hemispheres
160.6
Subcoeruleus area nTPM: 173.7
2369
Female, age 85, left hemisphere
212.8
2451
Male, age 74, both hemispheres
183.6
1958
Male, age 80, both hemispheres
168.9
2089
Male, age 76, left hemisphere
155.5
2323
Female, age 91, left hemisphere
147.7
Superior olive nTPM: 170.2
2561
Female, age 91, both hemispheres
179.3
2364
Male, age 74, right hemisphere
176.6
2329
Male, age 80, right hemisphere
170.0
2020
Male, age 76, both hemispheres
169.1
1875
Female, age 85, both hemispheres
155.8
Ventral periolivary nuclei nTPM: 163.5
2130
Female, age 85, both hemispheres
179.1
2165
Male, age 80, both hemispheres
175.2
2023
Male, age 76, both hemispheres
151.2
2794
Female, age 91, left hemisphere
148.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 201.8
2456
Female, age 91, both hemispheres
245.9
2161
Male, age 80, both hemispheres
201.5
2840
Female, age 85, both hemispheres
200.3
2359
Male, age 61, both hemispheres
191.6
2449
Male, age 74, both hemispheres
186.6
1959
Male, age 76, both hemispheres
184.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
49.6
Pig sample
Sample description
nTPM
Pons nTPM: 49.6
Samples: 4
Max nTPM: 50.7
Min nTPM: 48.8
Sample A
Female
49.4
Sample B
Female
49.5
Sample C
Male
48.8
Sample D
Male
50.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
