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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
286.8
nTPM
Monaco:
1297.4
nTPM
Schmiedel:
61.7
TPM
B-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
286.8
HPA sample
nTPM
Memory B-cell nTPM: 286.9
Samples: 6
Max nTPM: 364.0
Min nTPM: 219.1
P10809_1017
364.0
P10809_1025
256.9
P10809_1044
219.1
P10809_1063
285.9
P10809_1092
256.8
P10809_1105
338.4
Naive B-cell nTPM: 182.9
Samples: 6
Max nTPM: 242.6
Min nTPM: 112.3
P10809_1011
185.3
P10809_1029
112.3
P10809_1048
212.4
P10809_1067
194.7
P10809_1091
150.1
P10809_1104
242.6
B-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1297.4
Monaco sample
nTPM
Exhausted memory B-cell nTPM: 1194.7
Samples: 4
Max nTPM: 1578.3
Min nTPM: 702.5
RHH5310_R3677
1396.9
RHH5218_R3590
1101.0
RHH5247_R3619
1578.3
RHH5276_R3648
702.5
Naive B-cell nTPM: 833.7
Samples: 4
Max nTPM: 1295.8
Min nTPM: 429.7
RHH5308_R3675
896.3
RHH5216_R3588
1295.8
RHH5245_R3617
429.7
RHH5274_R3646
712.9
Non-switched memory B-cell nTPM: 1120.5
Samples: 4
Max nTPM: 1471.2
Min nTPM: 708.5
RHH5309_R3676
1118.9
RHH5217_R3589
1183.5
RHH5246_R3618
1471.2
RHH5275_R3647
708.5
Plasmablast nTPM: 804.0
Samples: 4
Max nTPM: 1026.5
Min nTPM: 526.0
RHH5312_R3679
829.5
RHH5220_R3592
834.1
RHH5249_R3621
1026.5
RHH5278_R3650
526.0
Switched memory B-cell nTPM: 1297.4
Samples: 4
Max nTPM: 1727.5
Min nTPM: 850.2
RHH5311_R3678
1727.5
RHH5219_R3591
1501.5
RHH5248_R3620
1110.5
RHH5277_R3649
850.2
B-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
