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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
85.9
nTPM
GTEx:
85.9
nTPM
FANTOM5:
30.7
Scaled Tags Per Million
Pig:
48.9
nTPM
Mouse:
39.3
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
85.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 85.9
Samples: 105
Max nTPM: 155.7
Min nTPM: 46.2
Std nTPM: 20.9
Median nTPM:
413_1
59 years, female
155.7
415_1
77 years, female
153.5
466_1
57 years, female
131.8
229_1
69 years, female
124.6
217_1
76 years, male
124.2
414_1
84 years, female
122.7
490_1
67 years, female
121.1
491_1
89 years, female
120.3
142_1
61 years, female
119.2
237_1
82 years, male
116.2
313_1
79 years, female
113.9
396_1
62 years, male
112.8
324_1
76 years, male
111.1
311_1
78 years, male
110.1
32_1
67 years, male
109.8
162_1
79 years, female
109.6
405_1
91 years, male
108.8
149_1
88 years, male
107.8
468_1
89 years, male
107.4
81_1
67 years, male
105.7
375_1
74 years, female
104.2
315_1
62 years, female
103.2
153_1
70 years, female
102.6
6_1
73 years, female
101.2
43_1
64 years, female
100.6
447_1
81 years, male
100.4
501_1
88 years, male
98.9
526_1
61 years, male
98.4
265_1
87 years, male
97.6
246_1
77 years, male
96.7
286_1
68 years, female
95.4
348_1
84 years, male
94.5
379_1
60 years, male
94.2
499_1
55 years, female
93.9
518_1
75 years, female
90.9
18_1
88 years, male
90.7
119_1
70 years, female
90.4
126_1
63 years, male
89.9
389_1
86 years, female
88.7
35_1
74 years, female
87.7
425_1
59 years, female
87.5
117_1
61 years, male
87.2
288_1
66 years, female
86.7
316_1
62 years, male
86.6
264_1
73 years, female
86.5
377_1
82 years, female
86.2
335_1
73 years, female
86.0
406_1
79 years, male
84.0
266_1
85 years, male
83.7
145_1
84 years, male
82.3
320_1
89 years, female
81.7
109_1
81 years, female
81.0
355_1
70 years, female
80.5
318_1
68 years, male
80.4
172_1
72 years, female
79.9
349_1
83 years, male
79.9
495_1
57 years, female
79.5
386_1
76 years, male
78.8
17_1
71 years, male
78.5
254_1
77 years, female
78.0
376_1
75 years, female
78.0
115_1
83 years, male
77.6
139_1
64 years, female
77.2
243_1
75 years, male
76.9
480_1
63 years, male
76.6
314_1
67 years, male
76.4
99_1
64 years, male
76.1
352_1
62 years, male
75.5
354_1
81 years, female
75.2
404_1
82 years, female
75.0
89_1
63 years, male
74.8
503_1
68 years, male
74.7
347_1
72 years, male
74.3
251_1
78 years, male
73.2
9_1
66 years, female
73.0
41_1
94 years, female
72.6
322_1
76 years, male
72.4
350_1
84 years, female
71.7
384_1
83 years, male
71.7
137_1
83 years, male
71.5
177_1
74 years, male
71.4
189_1
76 years, male
71.1
319_1
81 years, male
70.9
120_1
70 years, female
70.3
307_1
66 years, female
69.0
517_1
88 years, male
68.9
317_1
60 years, male
68.1
163_1
78 years, male
67.5
452_1
88 years, female
67.4
292_1
71 years, male
65.3
506_1
65 years, male
64.6
351_1
91 years, male
64.2
291_1
76 years, male
64.0
353_1
82 years, female
63.6
321_1
62 years, female
63.4
173_1
67 years, male
62.3
42_1
85 years, male
62.2
4_1
88 years, female
61.1
394_1
75 years, female
60.1
2_1
77 years, female
55.6
356_1
87 years, female
54.6
293_1
68 years, female
54.1
295_1
61 years, female
52.8
218_1
71 years, female
50.3
308_1
70 years, female
46.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
