HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:144.0 nTPM
HPA Brain:238.8 nTPM
GTEx:144.0 nTPM
FANTOM5:201.1 Scaled Tags Per Million
Pig:400.6 nTPM
Mouse:702.4 nTPM
Allen mouse:14.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005459Antibody CAB010877
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 238.8
Sample id Sample description nTPM
Hippocampus
nTPM: 136.1
2621 Female, age 67, right hemisphere 202.0
1898 Male, age 80, left hemisphere 180.6
1855 Male, age 76, left hemisphere 152.1
2148 Female, age 91, left hemisphere 115.8
1911 Female, age 85, right hemisphere 89.2
2529 Female, age 94, left hemisphere 76.7
Dentate gyrus
nTPM: 146.9
2010 Male, age 76, both hemispheres 216.0
2530 Female, age 94, left hemisphere 159.8
2246 Female, age 85, both hemispheres 149.3
2531 Female, age 67, both hemispheres 134.5
1927 Female, age 91, both hemispheres 133.8
2528 Male, age 74, both hemispheres 87.8
Entorhinal gyrus
nTPM: 181.0
2764 Male, age 80, right hemisphere 269.1
2613 Female, age 94, left hemisphere 221.1
1938 Female, age 85, left hemisphere 188.1
1787 Male, age 76, left hemisphere 169.2
2686 Male, age 75, right hemisphere 154.1
2117 Female, age 91, right hemisphere 84.7
Hippocampus, CA1
nTPM: 166.3
2749 Male, age 80, left hemisphere 279.1
1873 Female, age 85, both hemispheres 190.4
2527 Male, age 74, both hemispheres 139.6
2045 Male, age 76, both hemispheres 124.5
2082 Female, age 91, right hemisphere 97.9
Hippocampus, CA2
nTPM: 139.3
1963 Male, age 80, left hemisphere 211.6
1892 Male, age 76, both hemispheres 205.1
1940 Female, age 85, left hemisphere 140.2
2113 Female, age 91, right hemisphere 97.3
2437 Female, age 94, left hemisphere 93.0
2249 Male, age 74, both hemispheres 88.8
Hippocampus, CA3
nTPM: 118.8
2861 Female, age 67, both hemispheres 156.9
1867 Male, age 76, both hemispheres 139.7
2137 Male, age 80, left hemisphere 133.5
2436 Male, age 74, both hemispheres 100.7
2620 Female, age 94, left hemisphere 94.8
1891 Female, age 85, both hemispheres 87.2
Parahippocampal cortex
nTPM: 195.5
1850 Male, age 80, both hemispheres 305.4
2532 Female, age 72, left hemisphere 290.0
2622 Female, age 67, right hemisphere 246.9
2245 Female, age 91, both hemispheres 236.7
1933 Female, age 85, both hemispheres 221.1
1990 Female, age 91, right hemisphere 145.8
2018 Male, age 76, both hemispheres 145.1
2693 Female, age 94, both hemispheres 142.9
2250 Female, age 67, right hemisphere 121.8
2692 Male, age 74, both hemispheres 99.1
Perirhinal gyrus
nTPM: 238.8
2848 Male, age 76, right hemisphere 278.1
1794 Male, age 80, right hemisphere 277.1
1841 Female, age 85, right hemisphere 256.0
1847 Female, age 91, left hemisphere 214.0
2521 Female, age 94, right hemisphere 168.9
Subiculum
nTPM: 103.5
1977 Female, age 85, both hemispheres 146.2
1901 Male, age 80, both hemispheres 115.2
2042 Male, age 76, both hemispheres 107.5
2438 Female, age 94, left hemisphere 92.9
2619 Male, age 74, both hemispheres 84.5
2729 Female, age 91, right hemisphere 74.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 144.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 144.0
Samples: 197

Max nTPM: 506.9
Min nTPM: 36.5
Std nTPM: 95.8
Median nTPM: 110.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 506.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 492.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 481.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 461.0
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 419.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 419.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 388.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 368.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 356.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 343.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 341.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 201.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 201.1
FF:10169-103B7 60 years, female 256.5
FF:10153-102I9 76 years, female 145.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 400.6
Pig sample Sample description nTPM
Subiculum
nTPM: 383.7
Samples: 4

Max nTPM: 479.7
Min nTPM: 298.6
Sample A Female 479.7
Sample B Female 374.4
Sample C Male 382.2
Sample D Male 298.6
Dorsal hippocampus
nTPM: 337.1
Samples: 4

Max nTPM: 473.4
Min nTPM: 206.7
Sample A Female 473.4
Sample B Female 397.0
Sample C Male 206.7
Sample D Male 271.1
Entorhinal cortex
nTPM: 372.2
Samples: 4

Max nTPM: 460.3
Min nTPM: 321.5
Sample A Female 344.6
Sample B Female 460.3
Sample C Male 321.5
Sample D Male 362.3
Ventral hippocampus
nTPM: 400.6
Samples: 4

Max nTPM: 458.6
Min nTPM: 302.7
Sample A Female 453.8
Sample B Female 302.7
Sample C Male 458.6
Sample D Male 387.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 702.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 544.1
Samples: 4

Max nTPM: 626.4
Min nTPM: 444.9
Sample A Male 444.9
Sample B Male 507.6
Sample C Female 597.5
Sample D Female 626.4
Hippocampal formation
nTPM: 702.4
Samples: 4

Max nTPM: 774.4
Min nTPM: 635.4
Sample A Male 774.4
Sample B Male 701.7
Sample C Female 698.2
Sample D Female 635.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.0
79908848 Antisense, RP_071218_03_E03, Mouse strain C57BL/6J (56 days, male) 16.6
79904550 Antisense, RP_071218_03_E03, Mouse strain C57BL/6J (56 days, male) 15.4
990 Antisense, RP_Baylor_103043, Mouse strain C57BL/6J (56 days, male) 11.4
986 Antisense, RP_Baylor_103043, Mouse strain C57BL/6J (56 days, male) 2.8

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