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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
160.6
nTPM
FANTOM5:
63.8
Scaled Tags Per Million
Pig:
178.4
nTPM
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
160.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 160.6
2188
Female, age 91, both hemispheres
193.3
2090
Male, age 80, both hemispheres
171.2
2301
Female, age 85, both hemispheres
161.3
1984
Male, age 76, both hemispheres
116.5
Dorsal cochlear nucleus nTPM: 136.8
2187
Female, age 91, both hemispheres
167.9
2370
Male, age 61, both hemispheres
153.6
2378
Male, age 80, both hemispheres
136.9
2802
Male, age 74, right hemisphere
122.8
2058
Male, age 76, both hemispheres
103.0
Dorsal tegmental nucleus nTPM: 148.7
2326
Male, age 74, both hemispheres
170.7
2358
Male, age 61, both hemispheres
155.4
2083
Male, age 80, both hemispheres
153.8
1936
Male, age 76, left hemisphere
114.9
Dorsolateral tegmental area nTPM: 139.5
2654
Male, age 80, both hemispheres
174.2
2337
Male, age 61, both hemispheres
144.7
2360
Male, age 74, both hemispheres
132.3
2751
Female, age 85, both hemispheres
128.3
2141
Male, age 76, both hemispheres
118.1
Kolliker-Fuse nucleus nTPM: 152.1
2793
Female, age 91, left hemisphere
182.6
2315
Male, age 76, right hemisphere
138.9
2163
Male, age 80, both hemispheres
134.8
Lateral lemniscal nuclei nTPM: 121.1
2169
Male, age 76, both hemispheres
140.9
2320
Female, age 91, left hemisphere
138.3
2746
Female, age 85, left hemisphere
114.8
2453
Male, age 74, right hemisphere
109.3
2036
Male, age 80, both hemispheres
102.2
Lateral parabrachial nucleus nTPM: 134.8
2792
Male, age 76, both hemispheres
164.0
2013
Male, age 80, both hemispheres
144.1
2139
Female, age 85, right hemisphere
123.6
2790
Male, age 61, both hemispheres
107.4
Lateral vestibular nucleus nTPM: 133.1
2311
Male, age 80, both hemispheres
152.6
2184
Male, age 76, both hemispheres
113.5
Locus coeruleus nTPM: 114.5
2720
Male, age 74, both hemispheres
169.3
2162
Male, age 80, both hemispheres
142.2
2123
Female, age 91, both hemispheres
114.5
2317
Female, age 72, unknown
107.1
2014
Male, age 55, unknown
104.1
1980
Male, age 76, both hemispheres
102.4
2788
Male, age 74, unknown
61.7
Medial parabrachial nucleus nTPM: 141.1
2170
Female, age 91, both hemispheres
184.2
2854
Male, age 80, both hemispheres
142.5
2156
Male, age 61, both hemispheres
130.6
2786
Male, age 76, both hemispheres
126.6
2463
Female, age 85, right hemisphere
121.7
Medial periolivary nuclei nTPM: 120.6
2458
Female, age 91, both hemispheres
135.3
2081
Male, age 80, both hemispheres
127.9
2063
Male, age 76, both hemispheres
127.6
2171
Female, age 85, both hemispheres
115.1
2791
Male, age 74, right hemisphere
97.2
Motor facial nucleus nTPM: 123.3
2697
Female, age 85, both hemispheres
151.9
2126
Male, age 61, both hemispheres
126.6
2795
Female, age 91, both hemispheres
121.3
2062
Male, age 76, both hemispheres
120.9
2365
Male, age 74, right hemisphere
117.8
2327
Male, age 80, both hemispheres
101.6
Motor trigeminal nucleus nTPM: 135.2
2321
Female, age 91, both hemispheres
159.7
2335
Male, age 61, both hemispheres
147.0
2560
Male, age 74, both hemispheres
134.1
2079
Male, age 80, both hemispheres
117.7
2309
Male, age 76, both hemispheres
117.4
Nuclei of the trapezoid body nTPM: 124.1
1983
Male, age 76, both hemispheres
149.3
2166
Male, age 80, both hemispheres
142.5
2368
Female, age 91, both hemispheres
123.2
2159
Male, age 61, both hemispheres
113.3
2735
Female, age 85, both hemispheres
92.3
Nucleus raphe magnus nTPM: 123.3
2328
Male, age 80, both hemispheres
140.3
2455
Male, age 74, both hemispheres
140.3
2459
Female, age 91, both hemispheres
130.7
2051
Male, age 76, both hemispheres
111.3
2172
Female, age 85, both hemispheres
108.8
2160
Male, age 61, both hemispheres
108.2
Paramedian reticular nucleus nTPM: 116.4
2313
Male, age 61, both hemispheres
131.2
2057
Male, age 80, both hemispheres
122.0
2050
Female, age 85, both hemispheres
111.5
2052
Male, age 76, both hemispheres
100.8
Pedunculopontine tegmental nucleus nTPM: 129.6
2334
Male, age 80, both hemispheres
149.0
2338
Male, age 61, both hemispheres
134.8
1921
Female, age 85, both hemispheres
105.1
Pontine nuclei nTPM: 130.3
2319
Female, age 91, both hemispheres
165.1
2115
Male, age 80, left hemisphere
145.7
2454
Male, age 74, left hemisphere
138.5
1863
Male, age 55, unknown
135.5
1968
Male, age 76, left hemisphere
132.2
2109
Female, age 72, unknown
118.8
2787
Female, age 85, both hemispheres
115.8
2727
Male, age 61, right hemisphere
90.5
Pontine raphe nucleus nTPM: 108.7
2122
Female, age 85, midline
112.8
2853
Male, age 76, midline
104.6
Posteroventral cochlear nucleus nTPM: 145.8
2135
Female, age 91, both hemispheres
182.1
2341
Male, age 80, both hemispheres
149.9
2371
Male, age 61, both hemispheres
147.7
2070
Male, age 76, both hemispheres
124.9
2752
Female, age 85, both hemispheres
124.3
Principal sensory trigeminal nucleus nTPM: 124.0
2367
Female, age 91, left hemisphere
157.2
2158
Male, age 61, both hemispheres
128.4
2324
Male, age 76, both hemispheres
126.6
2008
Male, age 80, left hemisphere
84.1
Reticular pontine nucleus, caudal nTPM: 136.1
2559
Male, age 74, both hemispheres
160.1
2092
Male, age 76, both hemispheres
140.9
2457
Female, age 91, both hemispheres
139.1
2332
Male, age 80, right hemisphere
104.0
Reticular pontine nucleus, oral nTPM: 139.8
2366
Female, age 91, both hemispheres
194.6
2167
Male, age 76, both hemispheres
140.0
2361
Male, age 74, both hemispheres
133.2
1939
Male, age 80, both hemispheres
123.2
2012
Female, age 85, both hemispheres
108.3
Reticulotegmental nucleus nTPM: 130.5
2452
Male, age 74, both hemispheres
152.4
2322
Female, age 91, both hemispheres
143.6
2333
Male, age 80, both hemispheres
118.0
2325
Male, age 76, both hemispheres
108.0
Spinal trigeminal nucleus, oral nTPM: 119.6
1978
Male, age 76, both hemispheres
130.3
2164
Male, age 80, both hemispheres
126.1
2737
Female, age 85, both hemispheres
102.4
Subcoeruleus area nTPM: 132.9
2451
Male, age 74, both hemispheres
165.6
2369
Female, age 85, left hemisphere
131.6
1958
Male, age 80, both hemispheres
128.7
2323
Female, age 91, left hemisphere
125.3
2089
Male, age 76, left hemisphere
113.2
Superior olive nTPM: 124.5
2020
Male, age 76, both hemispheres
144.7
2561
Female, age 91, both hemispheres
133.4
2329
Male, age 80, right hemisphere
120.9
2364
Male, age 74, right hemisphere
119.5
1875
Female, age 85, both hemispheres
103.8
Ventral periolivary nuclei nTPM: 124.7
2165
Male, age 80, both hemispheres
128.5
2794
Female, age 91, left hemisphere
126.2
2023
Male, age 76, both hemispheres
124.9
2130
Female, age 85, both hemispheres
119.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 122.9
2161
Male, age 80, both hemispheres
135.0
2840
Female, age 85, both hemispheres
134.1
2456
Female, age 91, both hemispheres
126.9
1959
Male, age 76, both hemispheres
118.9
2449
Male, age 74, both hemispheres
111.7
2359
Male, age 61, both hemispheres
111.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
