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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
83.2
nTPM
GTEx:
83.2
nTPM
FANTOM5:
64.8
Scaled Tags Per Million
Pig:
49.0
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
83.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 83.2
Samples: 105
Max nTPM: 203.9
Min nTPM: 17.7
Std nTPM: 37.8
Median nTPM: 0.0
452_1
88 years, female
203.9
218_1
71 years, female
153.0
321_1
62 years, female
152.8
319_1
81 years, male
143.6
163_1
78 years, male
141.0
377_1
82 years, female
139.6
320_1
89 years, female
137.8
353_1
82 years, female
133.2
355_1
70 years, female
129.6
394_1
75 years, female
128.2
376_1
75 years, female
127.7
384_1
83 years, male
127.1
351_1
91 years, male
125.8
354_1
81 years, female
122.8
386_1
76 years, male
120.8
406_1
79 years, male
120.6
173_1
67 years, male
120.3
506_1
65 years, male
119.8
379_1
60 years, male
118.2
177_1
74 years, male
117.5
295_1
61 years, female
116.9
349_1
83 years, male
116.5
322_1
76 years, male
115.7
317_1
60 years, male
114.3
243_1
75 years, male
113.4
356_1
87 years, female
113.0
172_1
72 years, female
111.7
447_1
81 years, male
110.4
41_1
94 years, female
109.8
335_1
73 years, female
106.8
292_1
71 years, male
106.5
352_1
62 years, male
106.2
318_1
68 years, male
105.4
264_1
73 years, female
104.3
389_1
86 years, female
102.9
348_1
84 years, male
102.0
350_1
84 years, female
102.0
251_1
78 years, male
101.6
404_1
82 years, female
100.8
237_1
82 years, male
100.5
347_1
72 years, male
99.9
405_1
91 years, male
98.7
189_1
76 years, male
98.1
4_1
88 years, female
98.0
503_1
68 years, male
95.8
375_1
74 years, female
94.5
316_1
62 years, male
93.8
293_1
68 years, female
93.4
2_1
77 years, female
90.5
480_1
63 years, male
87.8
99_1
64 years, male
86.3
17_1
71 years, male
86.0
145_1
84 years, male
85.8
153_1
70 years, female
85.2
137_1
83 years, male
84.9
6_1
73 years, female
83.6
526_1
61 years, male
83.1
286_1
68 years, female
80.6
425_1
59 years, female
80.3
291_1
76 years, male
80.0
266_1
85 years, male
79.1
396_1
62 years, male
77.0
265_1
87 years, male
76.6
115_1
83 years, male
76.0
517_1
88 years, male
75.6
254_1
77 years, female
75.2
246_1
77 years, male
73.7
229_1
69 years, female
73.6
217_1
76 years, male
72.1
120_1
70 years, female
66.1
109_1
81 years, female
62.9
518_1
75 years, female
61.8
18_1
88 years, male
61.0
314_1
67 years, male
58.9
311_1
78 years, male
57.1
126_1
63 years, male
56.0
9_1
66 years, female
54.4
35_1
74 years, female
52.9
324_1
76 years, male
52.0
307_1
66 years, female
50.8
468_1
89 years, male
48.7
499_1
55 years, female
48.5
288_1
66 years, female
46.5
42_1
85 years, male
45.2
313_1
79 years, female
44.9
308_1
70 years, female
37.9
117_1
61 years, male
37.8
81_1
67 years, male
34.7
142_1
61 years, female
33.5
495_1
57 years, female
32.4
162_1
79 years, female
32.3
119_1
70 years, female
31.7
315_1
62 years, female
30.1
501_1
88 years, male
28.2
139_1
64 years, female
27.4
491_1
89 years, female
26.7
149_1
88 years, male
25.7
414_1
84 years, female
25.4
466_1
57 years, female
24.5
32_1
67 years, male
24.0
89_1
63 years, male
23.1
413_1
59 years, female
23.0
43_1
64 years, female
19.7
415_1
77 years, female
18.7
490_1
67 years, female
17.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
