HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:3.9 nTPM
HPA Brain:21.8 nTPM
GTEx:3.9 nTPM
FANTOM5:22.2 Scaled Tags Per Million
Pig:5.1 nTPM
Mouse:4.8 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001200Antibody HPA018530Antibody CAB000035Antibody CAB068186Antibody CAB073534Antibody CAB080313Antibody CAB080314
Glial cells Not detectedNot detectedMediumNot detectedNot detectedMediumNot detected
Neuronal cells Not detectedNot detectedNot detectedNot detectedNot detectedMediumNot detected















HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.8
Sample id Sample description nTPM
Hippocampus
nTPM: 21.3
2148 Female, age 91, left hemisphere 25.8
1855 Male, age 76, left hemisphere 21.8
1911 Female, age 85, right hemisphere 21.6
2529 Female, age 94, left hemisphere 21.3
1898 Male, age 80, left hemisphere 19.0
2621 Female, age 67, right hemisphere 18.5
Dentate gyrus
nTPM: 19.5
2528 Male, age 74, both hemispheres 25.6
2246 Female, age 85, both hemispheres 23.1
2530 Female, age 94, left hemisphere 18.9
1927 Female, age 91, both hemispheres 17.3
2531 Female, age 67, both hemispheres 16.9
2010 Male, age 76, both hemispheres 15.6
Entorhinal gyrus
nTPM: 18.6
2117 Female, age 91, right hemisphere 24.1
1938 Female, age 85, left hemisphere 19.8
1787 Male, age 76, left hemisphere 19.1
2686 Male, age 75, right hemisphere 17.5
2764 Male, age 80, right hemisphere 16.8
2613 Female, age 94, left hemisphere 14.1
Hippocampus, CA1
nTPM: 18.4
2527 Male, age 74, both hemispheres 26.6
2082 Female, age 91, right hemisphere 22.0
1873 Female, age 85, both hemispheres 20.9
2749 Male, age 80, left hemisphere 12.0
2045 Male, age 76, both hemispheres 10.4
Hippocampus, CA2
nTPM: 19.9
2249 Male, age 74, both hemispheres 25.1
2113 Female, age 91, right hemisphere 22.2
1940 Female, age 85, left hemisphere 21.9
1963 Male, age 80, left hemisphere 20.4
2437 Female, age 94, left hemisphere 19.3
1892 Male, age 76, both hemispheres 10.5
Hippocampus, CA3
nTPM: 17.4
1891 Female, age 85, both hemispheres 21.7
2861 Female, age 67, both hemispheres 21.7
2436 Male, age 74, both hemispheres 19.4
2620 Female, age 94, left hemisphere 18.9
2137 Male, age 80, left hemisphere 11.9
1867 Male, age 76, both hemispheres 11.0
Parahippocampal cortex
nTPM: 19.4
2692 Male, age 74, both hemispheres 26.5
2622 Female, age 67, right hemisphere 22.7
1990 Female, age 91, right hemisphere 21.8
2250 Female, age 67, right hemisphere 20.2
1933 Female, age 85, both hemispheres 18.0
2245 Female, age 91, both hemispheres 18.0
2018 Male, age 76, both hemispheres 17.4
2693 Female, age 94, both hemispheres 16.8
1850 Male, age 80, both hemispheres 16.3
2532 Female, age 72, left hemisphere 16.1
Perirhinal gyrus
nTPM: 16.0
1847 Female, age 91, left hemisphere 19.3
1841 Female, age 85, right hemisphere 16.3
1794 Male, age 80, right hemisphere 16.1
2521 Female, age 94, right hemisphere 14.1
2848 Male, age 76, right hemisphere 14.1
Subiculum
nTPM: 21.8
2619 Male, age 74, both hemispheres 32.0
2729 Female, age 91, right hemisphere 28.9
1977 Female, age 85, both hemispheres 19.0
2042 Male, age 76, both hemispheres 17.2
2438 Female, age 94, left hemisphere 17.1
1901 Male, age 80, both hemispheres 16.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 3.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.9
Samples: 197

Max nTPM: 9.1
Min nTPM: 1.0
Std nTPM: 1.5
Median nTPM: 3.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 9.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 8.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 8.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 8.0
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 7.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 7.4
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 7.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 7.2
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 7.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 6.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 6.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.2
FF:10153-102I9 76 years, female 34.1
FF:10169-103B7 60 years, female 10.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.1
Pig sample Sample description nTPM
Subiculum
nTPM: 4.0
Samples: 4

Max nTPM: 4.7
Min nTPM: 3.5
Sample A Female 4.0
Sample B Female 3.8
Sample C Male 3.5
Sample D Male 4.7
Dorsal hippocampus
nTPM: 4.1
Samples: 4

Max nTPM: 4.8
Min nTPM: 3.4
Sample A Female 4.8
Sample B Female 4.5
Sample C Male 3.6
Sample D Male 3.4
Entorhinal cortex
nTPM: 3.0
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.5
Sample A Female 3.7
Sample B Female 2.5
Sample C Male 3.1
Sample D Male 2.7
Ventral hippocampus
nTPM: 5.1
Samples: 4

Max nTPM: 5.7
Min nTPM: 4.2
Sample A Female 5.7
Sample B Female 4.2
Sample C Male 5.7
Sample D Male 4.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.8
Samples: 4

Max nTPM: 5.3
Min nTPM: 4.2
Sample A Male 5.3
Sample B Male 4.2
Sample C Female 4.7
Sample D Female 5.1
Hippocampal formation
nTPM: 3.0
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.7
Sample A Male 3.1
Sample B Male 2.9
Sample C Female 2.7
Sample D Female 3.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
81599632 Antisense, RP_071128_03_G02, Mouse strain C57BL/6J (56 days, male) 1.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org