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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
455.6
nTPM
FANTOM5:
3.7
Scaled Tags Per Million
Pig:
531.1
nTPM
Allen mouse:
13.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
455.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 444.9
2090
Male, age 80, both hemispheres
501.0
2188
Female, age 91, both hemispheres
456.6
2301
Female, age 85, both hemispheres
420.3
1984
Male, age 76, both hemispheres
401.9
Dorsal cochlear nucleus nTPM: 448.6
2802
Male, age 74, right hemisphere
509.7
2187
Female, age 91, both hemispheres
474.3
2378
Male, age 80, both hemispheres
474.0
2370
Male, age 61, both hemispheres
411.1
2058
Male, age 76, both hemispheres
373.9
Dorsal tegmental nucleus nTPM: 417.6
2326
Male, age 74, both hemispheres
476.4
2083
Male, age 80, both hemispheres
473.1
2358
Male, age 61, both hemispheres
363.2
1936
Male, age 76, left hemisphere
357.6
Dorsolateral tegmental area nTPM: 433.0
2654
Male, age 80, both hemispheres
505.3
2337
Male, age 61, both hemispheres
467.4
2360
Male, age 74, both hemispheres
419.3
2751
Female, age 85, both hemispheres
415.2
2141
Male, age 76, both hemispheres
357.9
Kolliker-Fuse nucleus nTPM: 427.4
2315
Male, age 76, right hemisphere
481.7
2163
Male, age 80, both hemispheres
402.7
2793
Female, age 91, left hemisphere
397.8
Lateral lemniscal nuclei nTPM: 354.7
2169
Male, age 76, both hemispheres
453.2
2746
Female, age 85, left hemisphere
387.6
2320
Female, age 91, left hemisphere
340.9
2453
Male, age 74, right hemisphere
323.0
2036
Male, age 80, both hemispheres
268.8
Lateral parabrachial nucleus nTPM: 441.4
2792
Male, age 76, both hemispheres
520.6
2139
Female, age 85, right hemisphere
461.3
2013
Male, age 80, both hemispheres
452.8
2790
Male, age 61, both hemispheres
331.0
Lateral vestibular nucleus nTPM: 384.0
2311
Male, age 80, both hemispheres
446.6
2184
Male, age 76, both hemispheres
321.3
Locus coeruleus nTPM: 356.2
2720
Male, age 74, both hemispheres
386.4
2123
Female, age 91, both hemispheres
382.6
2014
Male, age 55, unknown
369.9
2162
Male, age 80, both hemispheres
369.8
2317
Female, age 72, unknown
353.5
2788
Male, age 74, unknown
348.1
1980
Male, age 76, both hemispheres
283.1
Medial parabrachial nucleus nTPM: 405.0
2170
Female, age 91, both hemispheres
502.6
2854
Male, age 80, both hemispheres
449.4
2463
Female, age 85, right hemisphere
393.5
2786
Male, age 76, both hemispheres
361.6
2156
Male, age 61, both hemispheres
317.7
Medial periolivary nuclei nTPM: 423.0
2063
Male, age 76, both hemispheres
538.0
2081
Male, age 80, both hemispheres
414.4
2791
Male, age 74, right hemisphere
398.7
2171
Female, age 85, both hemispheres
392.9
2458
Female, age 91, both hemispheres
371.3
Motor facial nucleus nTPM: 396.3
2062
Male, age 76, both hemispheres
490.7
2126
Male, age 61, both hemispheres
419.2
2697
Female, age 85, both hemispheres
392.5
2795
Female, age 91, both hemispheres
384.5
2365
Male, age 74, right hemisphere
379.3
2327
Male, age 80, both hemispheres
311.4
Motor trigeminal nucleus nTPM: 370.9
2309
Male, age 76, both hemispheres
389.6
2321
Female, age 91, both hemispheres
385.3
2560
Male, age 74, both hemispheres
383.8
2335
Male, age 61, both hemispheres
355.2
2079
Male, age 80, both hemispheres
340.7
Nuclei of the trapezoid body nTPM: 419.7
1983
Male, age 76, both hemispheres
559.1
2159
Male, age 61, both hemispheres
412.6
2166
Male, age 80, both hemispheres
390.2
2735
Female, age 85, both hemispheres
384.9
2368
Female, age 91, both hemispheres
351.9
Nucleus raphe magnus nTPM: 379.3
2051
Male, age 76, both hemispheres
420.6
2160
Male, age 61, both hemispheres
392.1
2459
Female, age 91, both hemispheres
381.3
2172
Female, age 85, both hemispheres
365.6
2455
Male, age 74, both hemispheres
360.6
2328
Male, age 80, both hemispheres
355.5
Paramedian reticular nucleus nTPM: 411.5
2057
Male, age 80, both hemispheres
416.9
2052
Male, age 76, both hemispheres
413.6
2050
Female, age 85, both hemispheres
410.5
2313
Male, age 61, both hemispheres
405.0
Pedunculopontine tegmental nucleus nTPM: 415.6
2338
Male, age 61, both hemispheres
476.7
2334
Male, age 80, both hemispheres
431.7
1921
Female, age 85, both hemispheres
338.5
Pontine nuclei nTPM: 410.4
1863
Male, age 55, unknown
450.7
1968
Male, age 76, left hemisphere
439.6
2319
Female, age 91, both hemispheres
421.7
2727
Male, age 61, right hemisphere
406.3
2109
Female, age 72, unknown
394.7
2787
Female, age 85, both hemispheres
392.4
2454
Male, age 74, left hemisphere
390.7
2115
Male, age 80, left hemisphere
386.8
Pontine raphe nucleus nTPM: 396.1
2122
Female, age 85, midline
415.0
2853
Male, age 76, midline
377.3
Posteroventral cochlear nucleus nTPM: 455.6
2341
Male, age 80, both hemispheres
536.8
2135
Female, age 91, both hemispheres
486.0
2371
Male, age 61, both hemispheres
461.2
2752
Female, age 85, both hemispheres
433.8
2070
Male, age 76, both hemispheres
360.2
Principal sensory trigeminal nucleus nTPM: 364.1
2158
Male, age 61, both hemispheres
383.4
2367
Female, age 91, left hemisphere
367.6
2324
Male, age 76, both hemispheres
363.2
2008
Male, age 80, left hemisphere
342.0
Reticular pontine nucleus, caudal nTPM: 401.4
2092
Male, age 76, both hemispheres
477.6
2559
Male, age 74, both hemispheres
446.1
2457
Female, age 91, both hemispheres
398.1
2332
Male, age 80, right hemisphere
283.6
Reticular pontine nucleus, oral nTPM: 396.6
1939
Male, age 80, both hemispheres
445.4
2167
Male, age 76, both hemispheres
401.5
2366
Female, age 91, both hemispheres
397.3
2012
Female, age 85, both hemispheres
378.5
2361
Male, age 74, both hemispheres
360.5
Reticulotegmental nucleus nTPM: 393.4
2322
Female, age 91, both hemispheres
440.7
2452
Male, age 74, both hemispheres
407.2
2325
Male, age 76, both hemispheres
372.0
2333
Male, age 80, both hemispheres
354.0
Spinal trigeminal nucleus, oral nTPM: 351.0
1978
Male, age 76, both hemispheres
359.5
2164
Male, age 80, both hemispheres
348.7
2737
Female, age 85, both hemispheres
344.7
Subcoeruleus area nTPM: 409.1
2451
Male, age 74, both hemispheres
456.2
1958
Male, age 80, both hemispheres
420.0
2369
Female, age 85, left hemisphere
414.3
2089
Male, age 76, left hemisphere
384.9
2323
Female, age 91, left hemisphere
369.9
Superior olive nTPM: 404.1
2020
Male, age 76, both hemispheres
496.4
1875
Female, age 85, both hemispheres
413.7
2364
Male, age 74, right hemisphere
398.0
2561
Female, age 91, both hemispheres
359.2
2329
Male, age 80, right hemisphere
353.1
Ventral periolivary nuclei nTPM: 414.7
2023
Male, age 76, both hemispheres
503.8
2130
Female, age 85, both hemispheres
398.5
2165
Male, age 80, both hemispheres
379.1
2794
Female, age 91, left hemisphere
377.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 381.2
1959
Male, age 76, both hemispheres
449.3
2161
Male, age 80, both hemispheres
391.9
2840
Female, age 85, both hemispheres
391.5
2359
Male, age 61, both hemispheres
367.4
2456
Female, age 91, both hemispheres
357.4
2449
Male, age 74, both hemispheres
329.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
531.1
Pig sample
Sample description
nTPM
Pons nTPM: 531.1
Samples: 4
Max nTPM: 670.9
Min nTPM: 401.6
Sample A
Female
500.4
Sample B
Female
401.6
Sample C
Male
670.9
Sample D
Male
551.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
