HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:869.6 nTPM
HPA Brain:352.1 nTPM
GTEx:869.6 nTPM
FANTOM5:1.5 Scaled Tags Per Million
Pig:452.0 nTPM
Mouse:582.2 nTPM
Allen mouse:23.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058373
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 352.1
Sample id Sample description nTPM
Hippocampus
nTPM: 346.3
1898 Male, age 80, left hemisphere 410.8
2529 Female, age 94, left hemisphere 387.6
2621 Female, age 67, right hemisphere 344.8
1911 Female, age 85, right hemisphere 320.0
2148 Female, age 91, left hemisphere 319.9
1855 Male, age 76, left hemisphere 294.4
Dentate gyrus
nTPM: 347.8
2530 Female, age 94, left hemisphere 437.5
1927 Female, age 91, both hemispheres 352.2
2246 Female, age 85, both hemispheres 330.5
2528 Male, age 74, both hemispheres 326.4
2531 Female, age 67, both hemispheres 325.8
2010 Male, age 76, both hemispheres 314.5
Entorhinal gyrus
nTPM: 330.5
2686 Male, age 75, right hemisphere 382.0
1938 Female, age 85, left hemisphere 364.4
1787 Male, age 76, left hemisphere 324.1
2117 Female, age 91, right hemisphere 316.7
2764 Male, age 80, right hemisphere 307.8
2613 Female, age 94, left hemisphere 288.2
Hippocampus, CA1
nTPM: 323.9
1873 Female, age 85, both hemispheres 347.2
2082 Female, age 91, right hemisphere 332.3
2045 Male, age 76, both hemispheres 317.2
2749 Male, age 80, left hemisphere 316.7
2527 Male, age 74, both hemispheres 306.2
Hippocampus, CA2
nTPM: 341.0
1892 Male, age 76, both hemispheres 387.9
1963 Male, age 80, left hemisphere 379.9
2249 Male, age 74, both hemispheres 333.8
2113 Female, age 91, right hemisphere 324.4
1940 Female, age 85, left hemisphere 313.8
2437 Female, age 94, left hemisphere 306.3
Hippocampus, CA3
nTPM: 318.5
1867 Male, age 76, both hemispheres 388.2
1891 Female, age 85, both hemispheres 357.3
2137 Male, age 80, left hemisphere 322.1
2436 Male, age 74, both hemispheres 300.7
2861 Female, age 67, both hemispheres 293.9
2620 Female, age 94, left hemisphere 248.5
Parahippocampal cortex
nTPM: 321.6
1850 Male, age 80, both hemispheres 389.5
2018 Male, age 76, both hemispheres 369.3
2250 Female, age 67, right hemisphere 344.7
1933 Female, age 85, both hemispheres 335.1
1990 Female, age 91, right hemisphere 330.4
2245 Female, age 91, both hemispheres 307.0
2532 Female, age 72, left hemisphere 302.1
2692 Male, age 74, both hemispheres 290.5
2693 Female, age 94, both hemispheres 287.6
2622 Female, age 67, right hemisphere 259.8
Perirhinal gyrus
nTPM: 352.1
1841 Female, age 85, right hemisphere 397.5
1847 Female, age 91, left hemisphere 372.2
1794 Male, age 80, right hemisphere 349.9
2848 Male, age 76, right hemisphere 345.7
2521 Female, age 94, right hemisphere 294.9
Subiculum
nTPM: 338.8
1977 Female, age 85, both hemispheres 394.2
2042 Male, age 76, both hemispheres 365.0
1901 Male, age 80, both hemispheres 338.0
2438 Female, age 94, left hemisphere 329.3
2729 Female, age 91, right hemisphere 314.7
2619 Male, age 74, both hemispheres 291.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 869.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 869.6
Samples: 197

Max nTPM: 2111.8
Min nTPM: 481.2
Std nTPM: 258.1
Median nTPM: 829.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2111.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1837.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1595.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1529.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1522.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1508.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1490.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1471.4
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 1470.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1379.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 1368.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.5
FF:10153-102I9 76 years, female 2.0
FF:10169-103B7 60 years, female 1.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 452.0
Pig sample Sample description nTPM
Subiculum
nTPM: 387.8
Samples: 4

Max nTPM: 537.1
Min nTPM: 322.0
Sample A Female 537.1
Sample B Female 359.6
Sample C Male 322.0
Sample D Male 332.5
Dorsal hippocampus
nTPM: 452.0
Samples: 4

Max nTPM: 550.9
Min nTPM: 338.9
Sample A Female 550.9
Sample B Female 398.6
Sample C Male 519.7
Sample D Male 338.9
Entorhinal cortex
nTPM: 373.7
Samples: 4

Max nTPM: 472.9
Min nTPM: 267.6
Sample A Female 318.3
Sample B Female 472.9
Sample C Male 436.1
Sample D Male 267.6
Ventral hippocampus
nTPM: 371.4
Samples: 4

Max nTPM: 401.7
Min nTPM: 355.7
Sample A Female 401.7
Sample B Female 355.7
Sample C Male 355.8
Sample D Male 372.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 582.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 513.0
Samples: 4

Max nTPM: 556.8
Min nTPM: 471.8
Sample A Male 528.3
Sample B Male 495.0
Sample C Female 556.8
Sample D Female 471.8
Hippocampal formation
nTPM: 582.2
Samples: 4

Max nTPM: 639.5
Min nTPM: 537.9
Sample A Male 639.5
Sample B Male 537.9
Sample C Female 574.6
Sample D Female 576.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.7
68410596 Antisense, RP_041214_02_C02, Mouse strain C57BL/6J (56 days, male) 23.7

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